Oceanimonas sp. GK1: GU3_12795
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Entry
GU3_12795 CDS
T01667
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce00541
Biosynthesis of various nucleotide sugars
oce00552
Teichoic acid biosynthesis
oce01100
Metabolic pathways
oce01250
Biosynthesis of nucleotide sugars
Module
oce_M01009
UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GU3_12795
00552 Teichoic acid biosynthesis
GU3_12795
Enzymes [BR:
oce01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
GU3_12795
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Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
KR
3Beta_HSD
adh_short
NAD_binding_4
C2185-like_N
PglD_N
CoA_binding
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AEY02314
LinkDB
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Position
complement(2787117..2789060)
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AA seq
647 aa
AA seq
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MIHQAIHWLFQQPRSVKRIISLLLDTLFISLAFWAAYLLRLDSSSLLGSFRHWLVLATMV
PVTLLCFVRFGLYRAVLRYLGHHATVVMMGGVAVSAVTMVLAAYYFNAFLPRSVPIIYAS
LALLLCGGARTMARALYNQSTKKQKTPVIIYGAGASGRQLNTSLTHGSEYRAVAFVDDNP
GLQKALLQGLTVYSPAELPWLVERFGAHKLLLAMPSISRQRRREIVDSLEELPVDMLTIP
GMADLVSGKAKLSELHEVNVEDLLGRDPVEPFPELIGANIRGKVVMVTGAGGSIGSELCR
QIVQQGPTTLVLFEMSEYALYQIDQELNGMCREAGYEVRIVPIMASVQRQNRLEAVMQTF
GVHTVYHAAACKHVPLVEYNVVEGVRNNVFGTWRAAEAAINCGVETFVLISTDKAVRPTN
VMGTSKRLAELVLQGLALRQSNTRFCMVRFGNVLGSSGSVVPLFKRQIRAGGPITLTHED
ITRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGEPVKIIDLARKMVRLMGYEVKDAKHPD
GDIEIQVTGLRPGEKLYEELLIGGNELPTAHPRIRTAHEVHLPWQDMAALLQELNTACEQ
YNQPRIRELLLQAPTAFNPQDGICDLVWQQSQAAETGNETKVVALAL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgatccatcaggccattcactggttgtttcaacagcctcgctcggtaaagcgtattatc
agcttgttgctggatacgctgtttatttcgctggcgttttgggcggcttacctgttgcgg
ctggacagctccagcctgctgggctcgttccggcactggctggtgctggcaaccatggtg
ccggttacgctgctgtgttttgtgcgctttggtctttaccgggcggtgctccgttatctg
gggcatcacgctactgtggtgatgatgggcggggtggcggtgtcggccgttaccatggtg
ctggcagcctattacttcaacgcctttttgccccgctctgtgcccattatttatgcctct
ctggcgttgctgctgtgtggcggtgcccgcaccatggcccgggcgctgtataaccagagc
accaaaaaacagaaaactcccgtcattatttacggtgccggcgcgtccggccggcagctg
aatacttcgcttacccatggcagcgaatatcgcgccgtggcctttgtggacgacaacccc
ggcctgcaaaaagcgctgctgcaggggttaacggtttactctccggccgagctgccctgg
ctggtggagcgctttggtgcccacaagctgttgctggccatgcccagcatcagccgccag
cgccgccgagaaattgtagacagcctggaagagctgcccgtagacatgctcaccattccc
ggcatggccgatctggtcagtggcaaggccaagctgagcgagctgcacgaagtgaatgtg
gaagacctgttggggcgggacccggtagaaccttttcccgagctgattggcgccaatatt
cgcggcaaggtggtgatggtgaccggtgccggcggctccattggttccgagctgtgccgg
caaatagtgcagcagggcccaaccactctggtgctgttcgaaatgtcggaatatgcgctt
tatcaaattgatcaggagctgaacggcatgtgtcgtgaggccggctatgaggtgcgcatt
gtgcccattatggcctcggtgcagcgtcaaaaccggctggaagcggtaatgcagacgttt
ggggtgcacaccgtgtatcacgctgccgcctgcaagcatgtgccgctggtggaatacaac
gtggtggaaggggtgcgcaacaatgtgttcggcacctggcgggcggcggaagcggccatt
aactgcggggtggaaacctttgtgcttatctccaccgacaaggccgtgcgccctaccaat
gtcatgggcaccagcaagcgcctggccgagctggtgttgcaggggctggctctgcgccag
agcaacacccgcttttgcatggtgcgctttggcaatgtgctgggctcttctggctctgtg
gtgccactgttcaagcggcagatccgcgccggcggccccattacccttactcacgaagac
attacccgctattttatgaccattcccgaggcggcccagctggtgatccaggccggcgcc
atgggtaagggcggcgatgtgtttgtgctggacatgggcgagccggtaaaaattatcgac
cttgcccgcaaaatggtgcggttaatggggtatgaggtaaaagacgccaaacacccggac
ggcgatatagaaatccaggttaccggcctgcgccccggcgagaagctgtatgaagagctg
ctgatcggcggcaatgagctacctaccgcccacccgcgcattcgcaccgctcatgaagtg
catctgccctggcaggacatggctgccctgttgcaggagctgaacaccgcctgcgagcaa
tataaccagccccgcattcgcgagctgctgctgcaggcgcccacagcattcaacccccag
gatggcatttgcgacctggtatggcagcaaagccaagctgctgaaaccgggaatgaaacc
aaggtagtggcgctggctttgtag
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