KEGG   Oceanimonas sp. GK1: GU3_13480
Entry
GU3_13480         CDS       T01667                                 
Name
(GenBank) cell wall degradation protein
  KO
K21470  L,D-transpeptidase YcbB
Organism
oce  Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:oce00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:oce01002]
    GU3_13480
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:oce01011]
    GU3_13480
Peptidases and inhibitors [BR:oce01002]
 Cysteine peptidases
  Family C82
   GU3_13480
Peptidoglycan biosynthesis and degradation proteins [BR:oce01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   GU3_13480
SSDB
Motif
Pfam: YkuD PG_binding_1
Other DBs
NCBI-ProteinID: AEY02449
UniProt: H2FT12
LinkDB
Position
complement(2935636..2937087)
AA seq 483 aa
MKRTLVTSWLCGLCLLSFTALASTWQEAPQARLQLHQLGLELALADVHPELTRRWQQAVS
ADTASEAADDRLWLGLAAFWRQWATLDFEQRQYLRTHKLVLTASEEEVARLGAAGEHRLA
LVRELVPGYGDYEALKAQLARLLALADEPWPAIAGATLRPGERGDAVLQLRRRLQRLGDL
PPGPEPEDPGLFDQTLAAAVAAFQHRHGLTVDGVVGPHTYGWLDLPPRRRAQLLMRSMLR
TLIGDSLPASYLLVNIPEYRLRLYQNRVSVLESDVIVGRDSRRTPIMHSAITNVVVNPPW
NVPRSIINKDIVPQLYRDPGYIARQGFEVIDSAGRVVPAEEWQYVLYMENRFPFRLRQKP
GSSNALGAWKFHLPNNDAIYLHDTPARGLFARDSRALSSGCVRVANAEQLALWLLSANWS
PERLAELKASQRTRWLPVSEPLPVFMVYWRGWLGADGLPRFRDDIYDFDKNLADPFLPSQ
RQS
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgaaaagaacccttgttaccagctggttgtgcggcctgtgcctgctgagtttcaccgcc
ctggcctcgacctggcaggaagcaccccaggcccggctgcaactgcaccagctggggctg
gagctggccctggccgacgtgcacccggagctgacccggcgctggcaacaggcggtatct
gccgacaccgcctctgaggcggcggacgaccgcctctggctggggctggccgccttctgg
cgccagtgggccaccctggactttgaacagcgccagtacctgcgaacccacaagctggtg
ctcaccgccagcgaagaggaagtggcccggctgggtgccgccggcgaacaccggctggca
ctggtgcgcgagctggtgcccggttacggtgattacgaggccctcaaggcgcagctggcc
cggctgctggccctggccgacgagccctggccggccattgccggcgccaccctaagaccg
ggggagcgtggtgacgcggtgctacagttgcgccggcggctgcaacggctgggggacttg
ccccccgggcccgagccagaggatcccggcctgttcgaccagaccctggcggcggcggtg
gcggcctttcagcatcgccacgggctgaccgtggacggcgtggtcggcccccacacctat
ggctggctggatctgccgccccggcgccgggcccagctgctgatgcgcagcatgttgcgc
actttgattggcgacagcctgccggcgtcctacctgctggtgaacattcccgaataccgg
ctgcggctttaccagaaccgggtgtcggtgctggaaagcgatgtgatcgtgggccgcgac
agccgccgcacccccattatgcacagtgccattaccaatgtggtggtcaacccgccctgg
aacgtgccccgctccattatcaataaagacatcgtgccccagctgtaccgggatccgggg
tatatcgcccgtcagggctttgaggtgatcgacagtgccggccgggtggtgcctgccgag
gaatggcaatatgtgctctatatggaaaaccgctttccgttccggctgcggcaaaagccc
ggcagcagcaatgccctgggcgcctggaagtttcacctgcccaacaacgacgccatttac
ctgcacgacaccccggcccgggggctgtttgcccgcgacagccgggcgctcagctccggc
tgtgtgcgggtggccaacgccgagcaactggcgctgtggttactgagtgccaactggagt
cctgagcggctggccgagctcaaggccagccagcgcacccgctggctgccggtgagcgag
ccgctgccggtatttatggtgtactggcggggctggctgggggccgacggcctgccccgc
tttcgggacgacatctacgacttcgacaaaaacctggcggatcccttcctgccgtcgcag
cggcaaagctga

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