Oceanimonas sp. GK1: GU3_13480
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Entry
GU3_13480 CDS
T01667
Name
(GenBank) cell wall degradation protein
KO
K21470
L,D-transpeptidase YcbB
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oce01002
]
GU3_13480
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oce01011
]
GU3_13480
Peptidases and inhibitors [BR:
oce01002
]
Cysteine peptidases
Family C82
GU3_13480
Peptidoglycan biosynthesis and degradation proteins [BR:
oce01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GU3_13480
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEY02449
UniProt:
H2FT12
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All DBs
Position
complement(2935636..2937087)
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AA seq
483 aa
AA seq
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MKRTLVTSWLCGLCLLSFTALASTWQEAPQARLQLHQLGLELALADVHPELTRRWQQAVS
ADTASEAADDRLWLGLAAFWRQWATLDFEQRQYLRTHKLVLTASEEEVARLGAAGEHRLA
LVRELVPGYGDYEALKAQLARLLALADEPWPAIAGATLRPGERGDAVLQLRRRLQRLGDL
PPGPEPEDPGLFDQTLAAAVAAFQHRHGLTVDGVVGPHTYGWLDLPPRRRAQLLMRSMLR
TLIGDSLPASYLLVNIPEYRLRLYQNRVSVLESDVIVGRDSRRTPIMHSAITNVVVNPPW
NVPRSIINKDIVPQLYRDPGYIARQGFEVIDSAGRVVPAEEWQYVLYMENRFPFRLRQKP
GSSNALGAWKFHLPNNDAIYLHDTPARGLFARDSRALSSGCVRVANAEQLALWLLSANWS
PERLAELKASQRTRWLPVSEPLPVFMVYWRGWLGADGLPRFRDDIYDFDKNLADPFLPSQ
RQS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacccttgttaccagctggttgtgcggcctgtgcctgctgagtttcaccgcc
ctggcctcgacctggcaggaagcaccccaggcccggctgcaactgcaccagctggggctg
gagctggccctggccgacgtgcacccggagctgacccggcgctggcaacaggcggtatct
gccgacaccgcctctgaggcggcggacgaccgcctctggctggggctggccgccttctgg
cgccagtgggccaccctggactttgaacagcgccagtacctgcgaacccacaagctggtg
ctcaccgccagcgaagaggaagtggcccggctgggtgccgccggcgaacaccggctggca
ctggtgcgcgagctggtgcccggttacggtgattacgaggccctcaaggcgcagctggcc
cggctgctggccctggccgacgagccctggccggccattgccggcgccaccctaagaccg
ggggagcgtggtgacgcggtgctacagttgcgccggcggctgcaacggctgggggacttg
ccccccgggcccgagccagaggatcccggcctgttcgaccagaccctggcggcggcggtg
gcggcctttcagcatcgccacgggctgaccgtggacggcgtggtcggcccccacacctat
ggctggctggatctgccgccccggcgccgggcccagctgctgatgcgcagcatgttgcgc
actttgattggcgacagcctgccggcgtcctacctgctggtgaacattcccgaataccgg
ctgcggctttaccagaaccgggtgtcggtgctggaaagcgatgtgatcgtgggccgcgac
agccgccgcacccccattatgcacagtgccattaccaatgtggtggtcaacccgccctgg
aacgtgccccgctccattatcaataaagacatcgtgccccagctgtaccgggatccgggg
tatatcgcccgtcagggctttgaggtgatcgacagtgccggccgggtggtgcctgccgag
gaatggcaatatgtgctctatatggaaaaccgctttccgttccggctgcggcaaaagccc
ggcagcagcaatgccctgggcgcctggaagtttcacctgcccaacaacgacgccatttac
ctgcacgacaccccggcccgggggctgtttgcccgcgacagccgggcgctcagctccggc
tgtgtgcgggtggccaacgccgagcaactggcgctgtggttactgagtgccaactggagt
cctgagcggctggccgagctcaaggccagccagcgcacccgctggctgccggtgagcgag
ccgctgccggtatttatggtgtactggcggggctggctgggggccgacggcctgccccgc
tttcgggacgacatctacgacttcgacaaaaacctggcggatcccttcctgccgtcgcag
cggcaaagctga
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