Oceanimonas sp. GK1: GU3_13940
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Entry
GU3_13940 CDS
T01667
Name
(GenBank) LafS
KO
K02405
RNA polymerase sigma factor FliA
Organism
oce
Oceanimonas sp. GK1
Pathway
oce02020
Two-component system
oce02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GU3_13940
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GU3_13940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oce03021
]
GU3_13940
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
oce02035
]
GU3_13940
Transcription machinery [BR:
oce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GU3_13940
Bacterial motility proteins [BR:
oce02035
]
Flagellar system
Flagellar assembly proteins
Stator
GU3_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AEY02541
LinkDB
All DBs
Position
complement(3032504..3033223)
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AA seq
239 aa
AA seq
DB search
MLVEPDWSRDAAAPAVSAEQERHWLNQYLPLVKRVLGQLRNQVNTVMDADDLAQIGIMGL
LEAIRRYGGPPDEGFAGFAFKRVRGAILDELRRHDWRPRQLRQQSHQCAQAERELMRRLG
RRPTETELAQTMGVTMDELRNIVYAGQMAEMESLQVLLEHGHEPAQDEALDRLEQQRQIQ
ALLTRLPAREQRLMSLYYQHDLNMKEIALVLDLTESRVCQLHKQCLALLNREFAQGGEK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttagtggaaccggactggagtcgggatgccgccgcgcccgcggtgagcgcggagcag
gaaaggcactggctcaatcagtacctgccgctggtcaagcgggtgctggggcagctcagg
aatcaggtcaatacggtgatggacgcggacgatctggcccagattggcatcatggggttg
ctggaagccattcgccgttacggcggcccgcccgacgaggggtttgccggctttgccttc
aagcgggtgcgcggcgccattctcgatgagctgcgtcgccacgactggcggccccgtcag
ctgcgccagcaaagccaccagtgcgcccaggcggaacgggagctgatgcgccggctgggc
cggcggcccaccgaaaccgagctggcacaaaccatgggcgtgaccatggacgagctgcgc
aacatcgtttacgccgggcagatggcggagatggaaagcctgcaggtattgctggagcac
ggtcacgagccggctcaggacgaggctctggaccggctggagcagcagcgccagatccag
gccctgcttacccggctgccggcccgggagcagcggctgatgtcgctgtattaccagcat
gatctgaacatgaaggaaatcgccctggtactggatttgaccgaatccagggtgtgtcag
ctgcacaagcagtgcctggcgttgttgaaccgggaatttgcccagggtggagaaaaataa
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