Oceanimonas sp. GK1: GU3_15085
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Entry
GU3_15085 CDS
T01667
Name
(GenBank) Msh-like protein
KO
K03555
DNA mismatch repair protein MutS
Organism
oce
Oceanimonas sp. GK1
Pathway
oce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GU3_15085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_15085
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GU3_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AEY02770
LinkDB
All DBs
Position
3291819..3294365
Genome browser
AA seq
848 aa
AA seq
DB search
MMQQYLALKAQHPDILLFYRMGDFYELFYDDAKKASRLLDISLTKRGKSAGTAIPMAGVP
YHAAENYLARLVQMGESVAICEQIGDPATSKGPVERQVVRIVTPGTLSDEALLNERQDNC
LAAVYHDGERFGYGILDVSTGRFVINQFDKEETLTAELQRTQPAELLYPEGFEWFGLIEQ
RKGLRRRPEWEFDLGTARHLLCQQFGTRDLVGFGVEQSTTALCAAGCLLQYVKDTQRTAL
PHINSVRLERRQDMVIMDAATRRNLELTLNLSGTVENTLAEVLDRTATPMGSRLLKRWIH
QPICNRNELAQRQDMIAALMADGSHDALHPLLRQVGDLERVLARLALRSARPRDLSRLRA
ALQAQPDIQTVLAEAEADCLAPLAQQISTFPELAELLEVAVVDTPPVVIRDGGVIRDGYN
AELDELRELAAGAHRYLEELEARERVATGISTLKVAYNKVHGFYIDVSRANAHLVPPHYV
RRQTLKNNERYIIPELKEYEDKVLNAQSKGLALEKRLYEALLDRLLEHLAPLQQSAAALA
SLDVLANLAERADSLNYCRPELTDDEVIDIEEGRHPVVEQVMTDPFIANPLALSNERKML
VITGPNMGGKSTYMRQTALIVLMAYMGSFVPAQQARIGRVDRIFTRIGASDDLASGRSTF
MVEMTETANILNNASRHSLVLMDEIGRGTSTYDGLALAWACADALANRLHAYTLFATHYF
ELTGLAALWPAVANVHLDAVEHGDTIAFMHAVQEGAASRSYGLQVAALAGVPKPVLSLAR
QKLTELESGRGAPAAEPALTEPQGSLPLFEEPLDDPALALLDELDPDEMTPRQALEQLYR
LKQARKDS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaatacctggccctgaaggcccagcatccggacattctgctgttctaccgc
atgggggatttttacgagctgttttacgacgatgccaagaaggcgtcacggttgctggac
atttccctgaccaagcgcggcaagtcggcgggcaccgccattcccatggccggggtgcct
taccacgcggcggaaaactacctggcgcggctggtgcaaatgggggagtcggtggccatt
tgcgagcaaattggcgatccggccaccagcaaggggccggtggagcgtcaggtggtgcgc
atcgtgacccccggtaccctgtccgatgaagccctgctcaatgaacgccaggacaattgc
ctggcggcggtgtaccacgatggcgaacgcttcggttacggcattctcgatgtcagtacc
ggccgctttgtgatcaaccagttcgacaaggaagaaaccctcaccgccgagctgcagcgc
acccagcccgccgagctgttgtacccggaaggctttgagtggtttggtcttatcgagcag
cgcaagggtctgcgccgccggcccgagtgggagtttgatctcggcaccgcccgtcacctg
ctgtgccagcagttcggcactcgggatctagtgggctttggcgttgagcagtccaccacc
gccctgtgcgccgccggctgcctgctgcagtatgtgaaagacactcagcgcaccgccctg
ccccatatcaacagcgtgcggctggagcggcgtcaggacatggtgatcatggacgccgcc
acccgccgcaatctggagctgaccctgaacctctcgggcacggtggaaaacaccctggcc
gaggtactcgaccgcactgcaacccccatgggcagccgcttgctcaagcgctggatccat
cagcccatctgcaaccgcaatgaactggcccagcgccaggacatgatcgccgcgctgatg
gcagacggcagccatgacgcgctgcatccgctgctgcgccaggtgggcgatctggagcgg
gtgctggcacggctggcgctgcgttcggcccggccccgggatctgagccggctgcgcgcc
gccctgcaggcccagccggacattcagacggtgctggccgaggccgaggctgactgcctg
gcaccactggcccaacagatcagcacctttcccgagctggcggagctgctggaagtggcg
gtagtggatacaccgccggtggtgatccgcgacggcggcgtgatacgggatggctacaat
gccgagctggatgaattgcgcgagctggccgccggtgcccaccgctacctggaagaactc
gaagcccgggagcgggtcgccaccggcatcagcaccctgaaagtggcctacaacaaggtg
cacggcttttatatcgatgtcagccgggccaacgcccacctggtgccgccgcactatgtg
cgccgccagaccctgaaaaacaatgagcgctacatcattcccgaactgaaggaatacgaa
gacaaggtactcaatgcccagagcaaggggctggcactggaaaaacgcctgtatgaagcg
ctgctcgaccggctgctagagcatcttgcccccttgcagcaaagcgccgcggcgctggcc
agcctggatgtgctggccaacctggcagagcgggccgacagcctgaattactgccggccc
gagctgaccgacgacgaggtgatcgacatcgaggaaggccgtcacccggtggtggagcag
gtgatgacggatccctttatcgccaacccgctggcgctctccaatgagcgtaagatgctg
gtgattaccggccccaacatgggcggtaaatccacctatatgcggcaaacggcgctgatc
gtgctgatggcctacatgggctcctttgtgcccgcacagcaggcccgcatcggtcgagta
gaccgcatcttcacccgcatcggcgcctcggacgatctggcctcgggccgctccaccttt
atggtggaaatgaccgaaactgccaatattctcaacaacgccagccgtcacagcctggtc
ttgatggacgaaatcggccgcggcaccagcacttacgacggcctggccctggcctgggcc
tgtgccgatgccctggccaaccggctgcacgcctataccctgttcgccactcactacttt
gagctgaccgggctggcggcactgtggccggcggtggccaacgtacacctggacgcggta
gagcacggcgacaccatcgccttcatgcacgcggtgcaggaaggggccgccagccgttcc
tacggcctgcaggtggcggccctggcgggagtaccaaagccggtgctgagcctggcccgg
cagaagcttaccgaattggaaagcggccggggggccccggccgcggagccggctctcacc
gagcctcaagggtcactgccgctgtttgaggagccactggatgatccggcgttggcgtta
ctggatgaactggatccggacgagatgacgccacggcaggcgctggagcagctgtaccgg
ctgaagcaagccagaaaagacagctga
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