Oceanimonas sp. GK1: GU3_15115
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Entry
GU3_15115 CDS
T01667
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oce03016
]
GU3_15115
Enzymes [BR:
oce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GU3_15115
Transfer RNA biogenesis [BR:
oce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GU3_15115
Prokaryotic type
GU3_15115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEY02776
UniProt:
H2FUV8
LinkDB
All DBs
Position
complement(3298395..3299438)
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AA seq
347 aa
AA seq
DB search
MNNNWHYLHGEPSLSGRLKAEPEHFVVREDLGFVPSGDGEHIFLHIRKRGQNTQWVARDL
ARLAGVAQRDVTWAGLKDRHAVTEQWFGVHLPGKEMPDFSSLENDDVQILAIARHHKKLK
TGALKGNHFELTLTGLQGEGCLDARLAAIRDRGVPNYFGEQRFGHNGGNIDQARAMFGGK
RIKDRNKRSMYLSAARSYLFNLAVSHRLAAGLGEQLLAGDCVMLAGSQSFFTLNDDNPLD
DALRARFASGDIRLSAPLWGRGRLPAEDEAGELEQAALANMQELQQGLEANGLKQERRAL
LLKPEQLNWQREADRLRLSFWLPAGSYATSLVREVIKETESHENTGE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaactggcattatctgcacggcgagcccagcctcagcggccggctcaaggcc
gagcccgaacattttgtggtgcgcgaggatctgggctttgtccccagcggcgacggcgag
catatttttctgcacattcgcaagcgcggccagaacacccagtgggtggcccgggacctg
gcccggctggccggggtggcccagcgcgatgtgacctgggccgggctcaaggaccggcac
gcggttaccgaacagtggttcggggtgcacctgccgggcaaggagatgcccgacttctcg
tccctggaaaacgacgatgtgcagatcctggccattgcccgtcaccacaaaaagctgaaa
accggcgccctcaagggcaaccactttgagttgaccctgaccggcttgcaaggtgagggc
tgtctcgatgcccggctggcggccattcgtgatcggggcgtgcccaactatttcggcgag
cagcgttttggccataacggcggcaatatcgaccaggccagggccatgtttggcggcaag
cgcatcaaggatcgcaacaagcggtcgatgtacttgtctgcggcccgcagttatctgttc
aacctggcggtgagccaccggctggcggcaggccttggcgagcaattgctggcgggcgac
tgcgtgatgctggcgggcagccagtcgtttttcaccctgaacgacgacaacccgctcgac
gacgccctgcgggcacggttcgcttccggcgacattcgcctgagcgcgccgctgtggggc
cggggccggttgccggccgaggacgaggccggcgagcttgagcaggcggcgctggccaat
atgcaggaactgcagcaggggctggaggccaacggcctgaagcaggagcgccgcgccctg
ctgctgaaaccggaacagctgaactggcagcgggaagcagaccgtctcaggctgtcgttc
tggctgccggcgggcagctatgccaccagcctggtgcgggaagtcatcaaggaaacggag
agccatgaaaatactggtgagtaa
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