Okeanomitos corallinicola: WJM97_01165
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Entry
WJM97_01165 CDS
T10416
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ocf Okeanomitos corallinicola
Pathway
ocf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJM97_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocf03400
]
WJM97_01165
Enzymes [BR:
ocf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WJM97_01165
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WJM97_01165
DNA repair and recombination proteins [BR:
ocf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WJM97_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WZB88341
LinkDB
All DBs
Position
264525..265358
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETVRRGLNQLTLNAEMTGGDVLLPRTIAYPFSIEEFIKNIQGSAIVSWHRRGK
YLLAELTNSSWLGVHLRMTGQLLWLNQDEPLHKHTRVRLLFENNQELRFIDQRTFGQMWY
VPGGVPVESIITGLAKLAVDPFSPEFTVEYLANKLQKSRRPIKTALLDQSIVAGLGNIYA
DEALFKSGILPTTICTELHESKIEPLRTAMIDVLSASIAVGGTTFSNFLNVKGVNGNYGG
EAWVYNRASEPCKVCGNVIQRIKLGGRSSHFCDQCQN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaagttgaaacagtaagacggggtttaaatcaattaaccctaaac
gcagaaatgacgggaggggatgtgttgctaccacgcaccattgcctacccgttttctatt
gaagaatttatcaaaaatattcaaggaagtgctattgtatcctggcatcgtcgcggcaaa
tatcttttagctgaacttaccaattcttcatggttgggtgtgcatctgcgaatgacaggg
caattattatggttaaatcaagatgaacctttacacaaacacaccagagttagattattg
tttgagaataaccaagaactaaggtttatagatcaacgcacttttgggcaaatgtggtat
gttcctggtggagttcctgtagaaagtattattacaggtttagctaaactagcagttgat
cctttttccccagagttcacggtagagtatttagcaaataaactgcaaaaatcccgtcgt
cccattaaaacagctttattagatcaatctatagtagcgggattgggtaatatttatgct
gatgaggctttatttaaaagtggtattttaccaactactatctgtacagaattacatgaa
agtaagatagaacctttaagaactgccatgattgatgttttgtccgctagtattgccgtt
ggggggacaacttttagtaatttcctcaatgtcaaaggtgtaaatggtaactatggtggt
gaagcttgggtttataatcgtgccagtgaaccttgtaaggtttgtggtaatgtgatacag
cggattaaattaggtgggcgttctagtcatttttgtgatcagtgtcagaattag
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