Okeanomitos corallinicola: WJM97_03235
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Entry
WJM97_03235 CDS
T10416
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ocf Okeanomitos corallinicola
Pathway
ocf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WJM97_03235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocf03021
]
WJM97_03235
03400 DNA repair and recombination proteins [BR:
ocf03400
]
WJM97_03235
Enzymes [BR:
ocf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WJM97_03235
Transcription machinery [BR:
ocf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WJM97_03235
DNA repair and recombination proteins [BR:
ocf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WJM97_03235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WZB88707
LinkDB
All DBs
Position
complement(766915..767859)
Genome browser
AA seq
314 aa
AA seq
DB search
MAQFQIECVESNTEESRSHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTSVTAVRIAG
VSHEFATVPGVREDVLEILMRMKEVILKSYSSQPQIGRLLVNGPATVTSAHFDLPSEVEI
IDPTQYIATLAEGGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSIFMPIRKVNYSV
EEARGDGTLKDRLLLEVWTNGSLSPQEALSSAAGILVDLFNPLKDISLEPTDIGSDIPDD
PTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDFTQEDLLEIKNFGQKSAEEVVEALQRR
LGITLPQERGSKPS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgaatgtgtagaatctaatactgaagaaagtcggagccattac
agtaaatttgttctcgaacccttagaacgtggtcaaggaacaacagtaggtaatgcgtta
cgccgggttttactttccaatttagaggggacatctgtaacagctgtgcgaatagctggt
gtttcccatgagtttgccacagttcctggtgtacgggaagatgtgttagaaatcctcatg
cggatgaaggaagtgatcctcaaaagctattcctctcaaccccaaattggtagattactc
gtcaacgggcctgcaacagttacatcggcacattttgacttgcccagtgaagtagagatt
attgatcctactcagtacatagccaccttagctgaaggtggcaaactggaaatggaattt
aggattgagagaggtaaaggataccggactgtagaacgcggaagggaagaagcaacgtct
ttagactttttgcagattgattcgatatttatgccgatccgcaaagtcaactacagcgtt
gaagaagctcgtggagatggaacactcaaagatagactactgttagaagtttggactaat
ggtagtctttcccctcaagaagcactgtcttcagctgcgggaattttggtggatttattc
aacccgttgaaagatatctctttagaaccaacagatataggttcagatatccccgacgat
cctactgctcaaattcctattgaagaattacaactttctgttcgagcttataactgtctc
aaacgagcgcaggtaaactccgtagcagatttgttggatttcacccaagaagacctctta
gaaattaagaactttggtcaaaagtcagcggaagaagtagtggaagctttacagcgacgt
ttaggcattactttaccgcaagaaaggggttctaaacccagctaa
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