Okeanomitos corallinicola: WJM97_04705
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Entry
WJM97_04705 CDS
T10416
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ocf Okeanomitos corallinicola
Pathway
ocf03410
Base excision repair
ocf03430
Mismatch repair
ocf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJM97_04705 (recJ)
03430 Mismatch repair
WJM97_04705 (recJ)
03440 Homologous recombination
WJM97_04705 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocf03400
]
WJM97_04705 (recJ)
DNA repair and recombination proteins [BR:
ocf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WJM97_04705 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WJM97_04705 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WJM97_04705 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WZB88985
UniProt:
A0ABZ2UVR3
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All DBs
Position
1084777..1086831
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AA seq
684 aa
AA seq
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MTNDKPIQRLPLQRWQIAPANIELAEKLANVSNISPIISQLLINRGMETPETAAKFINPE
SLNLPSPWEDFPDLAISVELLETAITNQEKIAICGDYDADGMTSTALLLRSLRALGANVD
YAIPSRMHEGYGINQRIVEEFKSEGVGLILTVDNGIAAFEPIARAKELGLKVIITDHHDL
PQNLPPADAILNPKLIAESSPYRGVAGVGVAYILAVSLAQQMGELKGLVKPMLALFTLGT
IADLAPLTGVNRRWVKRGLKLLPKSTVPGVEALIQVAGVQASEGENHQNPKNSKSLKPDD
IGFRLGPRINAIGRIGNPQTVIELLTTDDIGIALERAMQCEQINSERQKMCGEIEQEAIA
LVEDLYVENLHKDRILVVIKDNWHHGVIGIVASRLLERYGVPVFIGTFENDNMIRGSARG
IPEFNVFDALEYSHDLLGKYGGHKAAGGFSLPVDNLPALRSRLSEFANQCLEIQHLKPLL
KIDAQANFNQINQDLFQQLNILHPCGIENPDPVFWTPDVQVIQQQTVGKSRDHLKVILAQ
TIDNQRYEIKGIAWRWGDYFPLPTRLDVAYKLRENNFNGNNNIEMELVGVRLPQQVEKLF
TTPKFSQPTKFAYKQREYTCGIYQNGADSELRIKNSAGKVLVMQPENKLGLLGVNRDNAK
AVDLSLPQYDGIIQAAIQALSGNR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgacaaacctattcaacgtttacctcttcaacgttggcaaattgccccagca
aatattgaattagccgaaaaactagcgaatgtaagtaatatatcccccattatcagccag
ttgttaattaatcggggtatggaaacaccagaaacagcagcaaaatttatcaatcctgaa
tctttaaatttaccttctccttgggaagatttcccagatttagctatcagtgtagaatta
ttagaaactgctattactaatcaagaaaaaatcgctatttgtggtgattatgatgccgat
ggtatgactagcacggctttattattacgcagtctccgcgctttaggtgcaaatgttgat
tatgctattcccagtcggatgcacgaaggttatggtattaatcaacgaattgtggaagaa
ttcaaaagtgaaggtgtaggtttaattctcacggtagataatggtattgctgcttttgaa
ccgattgctagagctaaagaattaggcttaaaagttattattacagatcatcatgatctt
ccccaaaatttacctcctgctgatgcaattctcaacccgaaattaatcgccgaatcttcc
ccttaccgtggtgtagctggtgtaggagttgcctatattttagctgtctctttagcccaa
caaatgggagagttaaaaggtttagttaaacccatgttggctttatttacattaggaact
attgctgatttagctcctttaactggtgtaaatcggcggtgggtaaaacggggtttaaag
ttattacctaaatctactgtacccggagtagaagctttaattcaagttgctggagtccaa
gcaagtgaaggggaaaaccatcaaaatcctaaaaattctaaatctttaaaacctgatgat
attggttttcgcttgggtcccagaatcaatgctattggtagaattggcaacccgcaaact
gtgatagaattgctaactaccgatgatataggaattgctctagaaagagcaatgcagtgt
gaacaaatcaactctgaacgtcaaaaaatgtgcggagaaatcgaacaggaagcgatcgca
ctggtggaagatttatatgtagaaaatttacacaaagacaggattttagttgttatcaaa
gataattggcatcatggagtaattggtattgtcgcttctcgactattagaacgttatgga
gttccagtttttattggtacttttgaaaatgacaatatgattcgtggttccgcgcgagga
ataccggaatttaatgtatttgatgctttagaatatagtcatgatttgttaggtaaatat
ggaggacataaagccgcgggaggattttctttaccagtagataatttaccagctttgcga
tcgcgtttatcggaatttgctaatcaatgtttagaaattcaacacctcaaacctttacta
aaaatagatgctcaagcaaattttaatcaaattaatcaagatttattccaacaattaaat
attctccatccttgcgggattgaaaacccagatcctgtattttggactcctgatgttcaa
gtaattcaacagcaaactgtgggtaaaagtagagatcacctgaaagtaatcttagctcaa
actatagataatcaaagatatgaaattaaagggatagcttggcgttggggtgattatttt
cccctaccaacaagattagatgttgcttataaactacgggaaaataactttaatggtaac
aataatattgaaatggaattagttggtgtcagacttccccaacaggtggaaaaattattt
actacaccaaaattttctcaaccgacaaaatttgcatataaacaacgtgaatacacctgt
ggaatttatcaaaacggtgcggattcagaattaagaattaaaaatagcgcaggtaaggta
ttagttatgcagccagaaaataaactaggtttgttaggtgtcaatcgtgacaatgccaaa
gcagtagatttatctttacctcaatatgatggtattattcaagctgctattcaggcttta
tccgggaataggtga
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