Okeanomitos corallinicola: WJM97_05025
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Entry
WJM97_05025 CDS
T10416
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ocf Okeanomitos corallinicola
Pathway
ocf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WJM97_05025 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocf03400
]
WJM97_05025 (ruvB)
Enzymes [BR:
ocf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WJM97_05025 (ruvB)
DNA repair and recombination proteins [BR:
ocf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WJM97_05025 (ruvB)
RecFOR pathway proteins
WJM97_05025 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_14
AAA_16
nSTAND3
TIP49
Rad17
AAA_22
TsaE
Sigma54_activ_2
RNA_helicase
AAA_25
AAA_24
AAA_18
bpMoxR
AAA_17
AAA_33
Parvo_NS1
AAA_PrkA
IstB_IS21
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WZB89045
LinkDB
All DBs
Position
complement(1157162..1158277)
Genome browser
AA seq
371 aa
AA seq
DB search
MPIFSSKKQSPEPNGQPKQNRRSAKESSQQPSTQENILQPEAAINEEGKQEESIRPQKFA
DYIGQKDLKDVLDIAIKAAKSRGEVMDHLLLYGPPGLGKTTMAMILASEMGVNYKLTSAP
ALERPRDIVGILVNLKPGDVLFIDEIHRLSRMTEEILYPAMEDYRLDITVGKGSSARTRS
IPLSKFTLVGATTRVGALTSPLRDRFGLVQKLRFYEVDELSQIVLRTAELLKTPVNSEGA
TEIAKRSRGTPRIANRLLKRVRDYAEVKSFPEIDQHIAAEGLQLFQVDPCGLDWTDRKML
SVIIENFNGGPVGLETLAAATGEDTQTIEEVYEPYLMQIGYLSRTPRGRVATKTAYQHMG
FTPPNEQLSLL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgccgatattttcctcaaaaaaacagtctccagaaccaaacggacaaccaaagcaaaac
cggaggtcggctaaagagtcttctcaacaaccatctacacaggaaaatatactgcaaccg
gaagcagcaattaatgaagaaggtaagcaagaagaaagtattagaccccagaaatttgct
gattatattggacagaaagatttaaaagatgtcttagatattgccattaaagcagcaaaa
tctaggggtgaagtcatggatcacttgctgctatacggtccacctgggttgggtaaaacc
acgatggcgatgattttagcatcggaaatgggggtaaattataaacttaccagcgctcca
gctttggaaagaccaagggatattgtggggatattggtaaatctcaagcccggtgatgtg
ctgtttatagatgaaatacatcggctttcccggatgactgaagaaattttgtatccagca
atggaagattatcgcttagatatcaccgttggcaaaggttcgagtgccagaactagaagt
ataccgttatctaaatttaccttagtgggagcgacaacccgcgtcggtgctttaacttca
ccattacgcgatcgctttggtctagttcaaaaactgcgattttacgaagttgatgaactc
agtcaaattgttctgcggactgcggaattattaaaaactcccgttaactcagaaggagca
acagaaatcgccaaacgttcacggggaacaccgagaattgcgaatagactactaaaaaga
gtccgtgattatgcggaagtaaaatcatttccagaaattgatcaacatattgcagcggaa
ggattgcaactattccaagtcgatccttgcggtttagattggacagatcggaaaatgtta
agtgtaatcattgaaaacttcaatggtgggcctgtgggattagaaactctggccgcagcg
acaggagaagatacccaaactatagaagaagtttatgaaccatatttaatgcaaattgga
tatttaagtcgtacacctagaggtagagtagcgacaaaaacagcttatcaacacatgggt
tttacaccacctaatgagcagttatctttgttgtaa
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