Okeanomitos corallinicola: WJM97_05370
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Entry
WJM97_05370 CDS
T10416
Name
(GenBank) GAF domain-containing protein
KO
K11525
methyl-accepting chemotaxis protein PixJ
Organism
ocf Okeanomitos corallinicola
Pathway
ocf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WJM97_05370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ocf02035
]
WJM97_05370
Bacterial motility proteins [BR:
ocf02035
]
Pilus system
Positive phototactic motility proteins
WJM97_05370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GAF
GAF_2
MCPsignal
GAF_3
DUF5905
HAMP
Motif
Other DBs
NCBI-ProteinID:
WZB89109
UniProt:
A0ABZ2UVW5
LinkDB
All DBs
Position
1240061..1244446
Genome browser
AA seq
1461 aa
AA seq
DB search
MTTVYQSNEDRGNIFADTEKSEKSNGIVGENRRESYTPSTIAQEFKIWRQRFQYITSQMR
QAPDLDAVLKVTVGQIRDQVGGDRVLIYSFNNSDTGTVLAESRTTGWTPSLGENLPAILF
GLYTDQDYTEPVTIDDINQIQVTPYQKQLLDKFQVRASLTLPILIDNQPWGLLVIHNCGS
ERQWQEAEITLLSQISTEITYRLQSFELQKEIQQSALAKQSVAKVVSKILQQPDVDKIFQ
TTTQEVRQLLKCDRVGVYRFDHDWSGQFVSESVGNNWTKVVTPGFKMVWEDTHLQETKGG
RYAKGETFVVNDTYKIGLAQCHIDILEQFEAKAYVIAPIFSGEKLWGLLAAYQNTGARKW
QDWEVSFLTQIGLQFGVAISQGEYLEKFRKQSNQIAQIAKQEQALTKIVNRIRQSSNLED
IFKTTTQEARQALKCDRVAIYRFNPDWSGNFIAESVGTGWVKLVGAEINTLVEDTYFQET
KGARFAKGENLWVNDIYQENITPCYLELLETFETKAYVTVPIFFGDQLWGLLAAYQNSNP
REWQTSEINFLSQIALQFNLAKTQIDYTTDLAQRVEQEKTISSIINKIRQSRDVDEIFAT
TTQEVRQALRCDRVAVYQFTPDWGGEFVSESVGTGWTKLVGPGIKTVLDDTYLQDTKGGR
YANGETFVVNDTYKIGLAPCHIAILEQFEAKAYVIVPIFFGEKLWGLLAAYQNTGSREWR
ESEISFVQQIGWQFSLAKSQLDYIQKVQNQSQEIRQLAEQEKILNKIVNRIRQSLDLEEI
FKTATQEVRQALRCDRVGIYQFLPNWSGKFVAESVGSGWVKVATPDFNMVWEDAHLQETQ
GGRYAKGENFVVNDIYQAGHAQCHLEILEQVEAKAYMIVPVFYGEKLWGLLAAYQNTGTR
EWQPREVNFLEQIGLQISLAKSQIDYIEQVQSKSEELAQIAEQEKTFTKIVNRIRQSNDV
EEIFKTTTQELRQILKCDRTVVYQFTSDWGGEFVAESVGKGWVKLVGPDFKTTLDDPCLQ
NAKGGRYEKGDTLVVEDIYTSTLDPCYIEIIEKYEARGYIIAPILIGEQLWGLLAAYQNT
APREWEESETNLLSRLGDQLGLALQQAEYLKQLETQSSKLSEAAQREKAAKELLQQRSIQ
LLRAISPALGGDLTVRAPITEDELGTIADAYNGTLQALQQIVIQVQTSSQQVAQTSVNSS
SSLVGLTNLAKNQSDEITKALEDIQQMVNSTQAVASNAQLVQVAVQQANKTVDSGDTAMN
ETVNAIQAIRETVAQTSKKIKRLSESSQKISKVVNLISNFATQTNVLALNAAIEATRAGE
YGKGFAVVADEVRSLSRQSAAATIEIEKLVQEIQTETGEVAVAMETGIQQVVEGTNLVSE
TRQNLNAIVAATEEISQLIEGITAATQKQMDQSATVTTSMNDVAAIANKTFGESQEIAQV
FQSLSGMAQELLTTAGKFKVK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgtatatcaaagtaatgaagatagaggaaatatattcgctgatacagaaaaa
tcagaaaaatcgaacggtattgtaggagaaaatcgcagagaaagctatacacctagtaca
attgcccaggaatttaaaatttggaggcaacgctttcaatacattacatcccaaatgcga
caagctcccgatttagatgccgtattaaaagtaacagtaggacaaattcgggatcaagta
ggtggcgatcgcgtcttaatttatagttttaataactctgacactggaacagttttagct
gaatctagaaccacaggttggacaccatcattaggtgaaaatctcccagctattttattt
gggttatatacagatcaagactacacagaaccagttaccatagatgacattaatcaaatt
caagttaccccatatcaaaagcaactactagataaattccaagttagagctagtttaact
ttgccaattttgatagataatcaaccttggggattattagttatccacaactgcggatca
gaacggcaatggcaagaagcagaaattaccctcctctcgcaaattagtacagaaataacc
tacagattgcagagttttgaattacaaaaagagatccaacaatctgccttagccaaacaa
tcagtagccaaagttgttagcaagattttacaacaaccagacgtagataaaatctttcaa
actaccacccaagaagtccgacaactactcaaatgcgatcgcgtcggtgtgtaccgtttt
gaccatgactggagtggacaatttgtatccgaatccgtagggaataactggacaaaagtt
gttaccccaggcttcaaaatggtgtgggaagatacccacctgcaagaaaccaaaggtggc
agatatgccaaaggggaaacatttgtagttaacgacacctataaaattggtttagctcag
tgtcacattgatattttagaacagtttgaagccaaagcctatgtgattgctccgatcttt
tctggagaaaaattatggggattattggcagcttatcagaacaccggagctagaaaatgg
caagattgggaagtcagctttttaactcaaataggattgcaatttggtgtagctatttcc
caaggtgaatatttagaaaaattcagaaaacaatcaaatcaaatagcacaaattgccaaa
caagaacaagccctcaccaaaatagttaaccggattcgccaatcttccaacttagaagat
atctttaaaactaccacccaagaagcacgtcaagcactcaaatgcgatcgcgtcgccatt
tatcgttttaatccagattggagtggtaactttattgctgaatccgtaggaactggatgg
gtaaaactggttggtgcggaaatcaataccttagtagaagatacatacttccaagaaacc
aaaggtgcaagatttgccaaaggtgaaaacctctgggtaaatgacatctatcaagaaaac
attactccctgttacttggaactattagaaacatttgaaactaaagcctatgtgaccgtt
cctattttcttcggtgatcaattgtggggattattagcagcttatcaaaactcaaatccc
cgtgaatggcaaacatcagaaatcaactttctcagtcaaatagccttacagtttaacctc
gcaaaaacgcaaatagactacactactgatctggcacaaagagtcgaacaagaaaagaca
attagtagtattattaacaagattcgtcagtccagagacgtagacgaaatctttgctacc
actacccaagaagtacgtcaggctttaaggtgcgatcgcgtggcagtttatcaatttaca
cctgattggggcggtgaatttgtgtccgaatcagtaggtacagggtggacaaaattagtc
gggcctggcattaaaaccgtcctcgatgacacctatctccaagataccaaaggtggtaga
tatgccaacggcgaaacatttgtagttaacgacacctataaaattggtttagcaccctgt
cacatagccatattagaacaatttgaagcgaaagcctatgtgatagtccccatcttcttt
ggtgaaaaactctggggattattggcagcatatcaaaacacaggatcaagggagtggaga
gaatcagaaatcagctttgtacaacaaataggctggcaatttagtctagctaaatcacag
ttagattatatccaaaaagtccagaatcaatctcaagaaatcagacaacttgcagagcaa
gaaaaaatcctcaacaaaatagttaaccgcatccgtcaatccttagacttagaagaaata
ttcaaaaccgccacccaagaagttagacaggctttaaggtgcgatcgcgtcggtatttat
caatttttacccaactggagtggtaaatttgtcgccgaatctgtaggtagtggatgggta
aaagtagccacaccagactttaacatggtttgggaagatgcccacctgcaagaaacccaa
gggggtagatatgccaaaggtgaaaactttgtagttaacgacatctatcaagctggtcat
gctcaatgtcacttagaaatattagagcaagtagaagccaaagcttacatgatagttccc
gtattttacggagaaaaactatggggattattggcagcctaccaaaacacaggtactcgt
gaatggcaacctagagaagtcaactttttagaacagattggactgcaaattagtttagcc
aaatctcagatagactacatcgaacaagtacaatctaaatctgaagaactagctcaaata
gcggaacaagaaaaaacctttacgaagatagttaacagaattcgtcaatctaacgacgta
gaagagatatttaaaaccaccacccaagaactacgacaaatcctcaaatgcgatcgcaca
gtagtttatcaatttacctcagattggggtggtgaatttgtcgccgaatcagtaggcaaa
ggttgggtgaaattagtcgggccagactttaaaaccaccttagacgatccttgtctacaa
aatgccaaaggtggacgttatgaaaaaggtgacaccctagtagttgaagatatttatacc
tccaccctagacccttgctacatagaaattatcgaaaaatatgaagctagaggttatatc
atcgcccccatcctcattggtgagcaactctggggattattagcggcttatcaaaacaca
gcaccccgtgaatgggaagaatctgaaactaacctattatccagattaggtgatcaacta
ggactagctttacaacaagcagaatacctcaaacaattagaaacccaatcatccaaactt
tcagaagcagcccaacgggaaaaagccgccaaagaattactgcaacaacgctctattcag
ttactgagagccattagtccggcactcggtggtgacttaacagtccgcgcccccatcacc
gaagacgaactaggaacaattgccgatgcttacaacggtactctgcaagccctccaacag
atcgttattcaagtacaaacttcttcccagcaagttgctcaaacttccgttaacagtagt
tcttccctagtgggattaaccaatttagccaaaaaccaatctgacgaaatcactaaagcc
ctagaagatattcaacagatggtaaattctacccaagccgtagcatctaacgctcaattg
gtacaagttgcagtccaacaggctaacaaaactgtagactctggtgataccgccatgaac
gaaacagtaaatgctatccaggccattcgcgaaaccgtagctcaaaccagtaagaaaatt
aaacgtttgagtgaatcatcacagaaaatctctaaagtagttaacttgattagcaacttt
gccacccaaaccaacgtactagctttaaatgcagccatagaagccactcgtgctggtgaa
tatggtaaaggctttgccgtggtagccgatgaagttcgttcattatctcgccagtccgca
gccgctaccatcgaaattgaaaaattagtccaagaaattcaaactgaaactggagaagtt
gccgtagccatggaaacaggtattcagcaagtagtagaagggacaaacttagttagtgaa
acccgtcaaaacttaaacgccatcgttgcagctactgaggaaattagccaactaattgaa
ggtattaccgcagctacccaaaaacaaatggatcaatcagccacagtcacaacatcaatg
aatgatgtagcggctattgctaataaaaccttcggtgaatctcaagaaattgctcaagtc
ttccaaagcttatcaggaatggcgcaggagttactcacaactgctggtaaattcaaggtc
aaataa
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