Okeanomitos corallinicola: WJM97_05620
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Entry
WJM97_05620 CDS
T10416
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ocf Okeanomitos corallinicola
Pathway
ocf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJM97_05620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocf03400
]
WJM97_05620
Enzymes [BR:
ocf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
WJM97_05620
DNA repair and recombination proteins [BR:
ocf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WJM97_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WZB89158
LinkDB
All DBs
Position
complement(1302184..1302864)
Genome browser
AA seq
226 aa
AA seq
DB search
MNSNTQLSLFEESNFNQKDLIPTDGKITIPAHTYTTMTELTQHCENCHRCGLSENRTHAV
VGRGNLQAKIMIIGEAPGQQEDETGLPFVGKSGQLLEKILASVDLKRETDVYICNIVKCR
PPENRVPTPDEMAACKPYLLEQINLVKPKIILLTGATAVKGITGNKQGITKIRGQWMEWE
GHLCMPIFHPSYLLRNPSKEKGSPKWLMWQDIQAVKAKFDQLSANS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaacactcaacttagtctctttgaggaatcaaactttaaccaaaaagaccta
attcctacagatgggaaaataactattcccgctcatacttacaccaccatgacagaatta
acacagcactgtgaaaactgtcatcgttgtggcttgagcgaaaatcgtactcatgctgta
gtgggaagaggaaatctccaagccaaaatcatgattattggggaagcaccaggtcaacaa
gaggatgaaaccggtttaccatttgtgggtaagtctgggcagttactagagaaaattttg
gcatctgtagatttgaaaagggagacagatgtttatatttgcaacatagttaaatgtaga
ccaccggaaaatcgagttcctactcctgatgaaatggcggcttgcaaaccttatttatta
gaacaaattaaccttgttaaacccaaaattattttattaactggtgcaactgctgtaaaa
ggaattacaggaaataaacaaggaattacaaaaattcgtggtcagtggatggaatgggaa
ggacatttatgtatgcccattttccatccttcttatttgttacgtaatccctcgaaggaa
aaaggctcacctaaatggttaatgtggcaagatattcaagctgtaaaagccaagtttgat
cagttatcagctaacagttaa
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