KEGG   Okeanomitos corallinicola: WJM97_12285
Entry
WJM97_12285       CDS       T10416                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ocf  Okeanomitos corallinicola
Pathway
ocf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ocf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WJM97_12285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocf03019]
    WJM97_12285
Messenger RNA biogenesis [BR:ocf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WJM97_12285
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RMMBL RNase_J_C Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WZB86188
UniProt: A0ABZ2URX9
LinkDB
Position
2854025..2855809
AA seq 594 aa
MAKNEANAALKIIPLGGLHEIGKNTCVFEYEDEIILLDAGLAFPTEAMHGVNIVLPDTTY
LRENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRTE
LRTVMPRDVVRIGEAFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKIDHTPVDGERF
DLQRLAEHGEKGVLCLLSDSTNAEVPGFTPSESSVYPNLDRVFSQAAGRLFVTTFASSVH
RINLILQLAKKHNRVVTVVGRSMLNLIAHARNLGYIKCDDSLFQPLHTVRGLPDENVLIL
TTGSQGERMAAMTRIANKEHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGANVV
YGRDKGIHVSGHGCQEEQKLMIALTRPKFFVPFHGEHRMLIKHSQTAQSMGIPKENMVII
QNGDVIELTENSIGVGAKVPSGIELVDTTSSGMVSSKVLHERQRMASEGLATIAAAIDWN
GKLLAKPDIHLQGVVTSIEKSLMLKWLQQRIEEILSVRWPEFVTGQGMNDIDWGGVQGML
EKELARSLRRELQCQPSVTLLMQFPDEAQVQAQAQAVKVSDGRRRRTRSTAVAS
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggctaaaaacgaagctaatgctgccctaaaaattattcctttgggtggtttacatgaa
ataggtaaaaacacctgtgtgtttgagtatgaagacgaaatcattctcttggatgcaggt
ttggcctttcccacagaagcaatgcacggagtaaatatcgttttacctgacactacttat
ctacgggaaaatcgtcataaaattaaaggtatgatcgttactcacggtcacgaagatcac
attggtggtattgcttttcacctcaaacaatttgatatcccagtcatttatgggccaaga
ctagcaatggcaatgttagagggtaaattggaagaagcaggggtacgcgatcgcacggaa
ctaagaaccgtaatgccccgtgatgtagttagaatcggtgaagccttttttgttgagtac
attcgcaacactcactccatcgctgacagttttaccgttgccattcacaccccattaggt
gtagtgattcataccggagactttaaaattgaccataccccagtggatggtgaaagattt
gacttgcagcgtttagctgaacatggtgaaaaaggtgtactgtgcttattgagtgattcc
actaatgcagaagtaccaggatttacaccatcggaaagttccgtttatcctaaccttgac
cgggtattctcccaagccgcagggcgactatttgtaactacttttgcgtccagcgtccac
cgcatcaacttaatcttacagttagctaaaaagcataaccgagtagtaacagttgtggga
cgttcaatgttgaacttaattgcccatgcgcggaatttaggttacatcaaatgtgacgat
agcctatttcaacccctacatacagttcgtggtttaccagatgaaaacgtactgatttta
accactggttcgcaaggggaaagaatggcagctatgaccagaattgccaataaagagcat
ccccacattaaaattcgggaaggagatactgttgtcttctctgctaaccccattcctgga
aacaccattgcggtggtcaacaccattgataaattaatgattcaaggtgcaaacgttgtc
tatggcagagataaaggcattcacgtttccggtcacggttgtcaagaagaacaaaagcta
atgatagctttaacccgtcctaagttctttgtacctttccacggtgaacaccggatgttg
attaagcactcccaaactgctcaaagtatgggcattcccaaagaaaacatggtgattatt
caaaatggggatgtgatagaactgacagaaaattctatcggtgtgggtgctaaagtccca
tcaggaattgaactggtagatactacaagttcaggaatggtaagttctaaagtgctgcat
gagagacaacgcatggcttcggaaggactggctaccattgcagcggcaattgattggaat
ggtaaactactggctaaaccagatatccatttacaaggtgtggtaaccagtattgagaaa
tcactgatgttgaaatggttacagcaacggattgaagaaattctcagtgtgcgttggcca
gaatttgtgactggtcagggcatgaatgatatagattggggcggtgtgcaaggaatgtta
gaaaaagaattagctcgttctctacgtcgggagttgcaatgtcaaccttctgtaactctg
ttgatgcagtttccagatgaagctcaagttcaagctcaagctcaagcggttaaggtttct
gatggtagaagaagacggactcgttctactgctgtagcctcttaa

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