KEGG   Okeanomitos corallinicola: WJM97_14525
Entry
WJM97_14525       CDS       T10416                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ocf  Okeanomitos corallinicola
Brite
KEGG Orthology (KO) [BR:ocf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocf03400]
    WJM97_14525
Enzymes [BR:ocf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WJM97_14525
    5.6.2.6  RNA 3'-5' helicase
     WJM97_14525
DNA repair and recombination proteins [BR:ocf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    WJM97_14525
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WHD_Lhr Cas3-like_C_2
Other DBs
NCBI-ProteinID: WZB86609
UniProt: A0ABZ2UMW5
LinkDB
Position
3359837..3362011
AA seq 724 aa
MNNNTFSQLAPFIQEYIYLNNWTELRPIQTASCEVIFNTDAHLLIAAATAAGKTEAAFLP
VLTLLHENPIQTIGVLYISPIKALINDQFQRLNDLLKTADIPVYSWHGDVSQNRKNKLLK
NPQGVLQITPESLESLLINKHQELPRLFADLRFIIIDEIHAFMGSERGYQIICQLQRLGN
ITKVQPRRIGLSATLGDYSMAEKWLSLGTEKPVITPEIEAGKRQIKLALEHFFINKDIDE
SDYEKYIFNITKSRKCLIFANNRTQTESIISDLRNIATNSGFPDIYHVHHGSIAVSLRQA
AENAMREPNQPAVTAATLTLELGIDVGYLERVIQLESPLSVASFLQRLGRSGRRGEAADM
RFICAEEKPLSEDDLPKQIPWQLLQSIAIIQLYLESRWIEPIHPIKYPLSLLYHQTMSIL
SARGAISPAVLAQEIFKLAPFANISQDDYKLLLRYLIDINHIQKTETGKLMIGLGGEKIV
NKFQFYAVFADNQEYTVKQGNTEIGSIVIPPSVGNQFGLAGKSWEVLEVDLKKRVILVTQ
VEGKANGKDNMNWRGGSGNIHGRILQRMRQVLLEDTEYSYLQKNAKLRLQEVRKLTKKIG
LDKQNIIQLEKNKCCIFPWMGTVGYRTLERLINCFCRESLEISSIGGVNPYYLTLKVGKD
KFSDIYNEIVSLCEQRISAEHLVSHAEAPELQKYDQFIPDELLRTAFVNDYLDMEEMRNQ
VLKW
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgaacaacaatacattttctcaacttgcaccgtttatccaggaatatatctacctcaat
aattggacagaattaagacccatacaaacagcatcttgtgaagttatatttaacacagat
gcacatttattgattgctgctgctactgctgcgggaaaaactgaagctgcatttttacct
gttttaactttgttacatgaaaatcccattcagactattggtgtattgtatattagtccg
attaaagctttaattaatgaccaattccaacgcctcaatgacttattgaaaaccgcagat
attccggtatattcttggcatggtgatgtatctcaaaatcgtaaaaacaaactcttaaaa
aatccccaaggtgttttacaaattacgccagaatctttagaaagcttactaattaataaa
catcaagaactacctagattatttgctgatttacgatttatcatcattgatgaaattcac
gcttttatgggttcagaaagaggttatcaaattatttgtcaattacaaagattaggtaat
ataactaaagttcaacccagaaggattggattatcagcaacacttggtgattattctatg
gcagaaaaatggttaagtttaggaacagaaaagccagtaattactccagaaatagaagca
ggaaaacgacaaattaaattagcattagaacatttttttattaataaagatattgatgaa
tcagattacgaaaaatatatttttaacatcactaaatcccgtaaatgtttaatatttgct
aacaaccgcactcaaacagaatctattatttctgatttacggaatatagccacaaattca
ggattcccagacatatatcatgttcatcatggtagtattgctgttagtttacgacaagct
gcggaaaatgctatgcgtgaacctaatcaacctgcggtgacagctgcaactttaacctta
gaattaggcatagatgttggttatttagagagagtaattcaattagaatcacccttatct
gtggctagttttttacaaagattaggacgcagtggaagaaggggtgaagctgcggatatg
cggtttatttgtgctgaagaaaaacctttgtcagaagatgatttacccaaacaaataccc
tggcaacttttacaatctattgcaattattcaactttatttagaatcacggtggatagaa
ccaattcacccaattaaatatcctttgagtttactttatcatcaaaccatgagtatttta
tctgcaaggggagcaatttcacctgcggttttagctcaagaaatttttaaattagcccca
tttgctaatatttcccaggatgattataagttattactcagatatttaattgatattaat
catattcaaaaaacagaaactggtaaattaatgattggtttaggtggagaaaaaatagtt
aataaatttcagttttatgctgtgtttgcagataatcaagaatatactgtaaaacaagga
aatacagaaattggtagtattgttattcctccatctgtaggtaatcaatttgggttagct
ggtaagagttgggaagttttggaagttgacttaaagaaaagggtgattttggttacacaa
gttgaaggtaaagctaatggtaaagataatatgaattggcgtggtggaagtggtaatatt
catggtcgaattttacaaagaatgcgtcaggttttgttagaagatacagaatatagttat
ttacaaaaaaatgctaaattgcgtttgcaggaagtgaggaaattaactaaaaaaatagga
ttagataaacaaaatatcattcagttggaaaaaaataaatgttgtattttcccttggatg
ggtacggtaggttatcggactttagaaaggttgattaattgtttttgtcgagagtcgtta
gaaattagtagtattgggggtgtaaatccctattatttgactttaaaagtaggtaaggat
aagttttctgatatttataatgaaattgtttctttatgtgagcagagaattagcgcagaa
cacttagttagtcatgcagaagcaccagaattacaaaagtatgatcaatttattcctgat
gagttattaaggacagcttttgtgaatgattacttggatatggaggagatgagaaatcag
gttttaaagtggtaa

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