Okeanomitos corallinicola: WJM97_15760
Help
Entry
WJM97_15760 CDS
T10416
Name
(GenBank) RpoD/SigA family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ocf Okeanomitos corallinicola
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WJM97_15760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocf03021
]
WJM97_15760
Transcription machinery [BR:
ocf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJM97_15760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PIN_4
Motif
Other DBs
NCBI-ProteinID:
WZB86839
UniProt:
A0ABZ2UN93
LinkDB
All DBs
Position
complement(3623141..3624310)
Genome browser
AA seq
389 aa
AA seq
DB search
MYQTKQKSRKETMNIAELGKMETLDNAADHEEPSLDSLDAVVFEDSSITENLDSETKDGD
QMAAARPSGYNKTEHDDAVGAFFKEMARYPLLKAEEEVELARRVKFLEDVKDLQASLEAE
LGNTPSKSELAARFDLTEKQLESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDL
IQEGAMGLNRATEKFDPDKGYKFSTYAYWWIRQAITRAIANDARTIRLPIHIVEKLNKLK
KAQRELKQKFARNPTETEMAEYLEISVQQLRQLQQLRRQALSLNHRVGKEEDTELMDLLE
DEDNQSPEAKMNENMMRQEIWEVLGDVLTPREKDVISLRYGLTTSEPCTLEEVGNMFNLS
RERVRQIQSKAMRKLRRPHIAKRLKGWLI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaacaaagcaaaaatcccgaaaggaaactatgaatattgctgaattgggaaaa
atggaaacactcgataatgctgctgatcatgaagaaccatcacttgatagtttagatgca
gtagtatttgaagactcttcaattaccgaaaatttggactcagaaacgaaagacggggat
caaatggccgctgctcgtccttcgggatacaataaaaccgaacatgatgatgctgtgggc
gcgttttttaaggaaatggcgcgttatcctctgctcaaggcggaagaagaagtagaatta
gctcgtcgggtgaagtttttggaagatgtcaaagatctacaagcatctctagaagctgaa
ctgggaaacactcctagtaaaagtgaactagcagctagatttgatctgacagaaaaacaa
ttagaaagccgattatatcaaggaagggtagcaaagcggaaaatgatccgctcaaatttg
cggttagtagtttctattgctaaacgatatctaaaccggggcgttcctttcttagattta
attcaagaaggggctatggggttaaatcgcgctacagaaaagtttgatcccgataaaggc
tataaattttcaacttatgcttattggtggatacgtcaagctattacacgagcgatcgcc
aatgatgctcgcactatccgtctacctattcacattgttgaaaaactcaacaaactgaaa
aaagcccagcgagaacttaaacaaaaattcgctcgcaacccaacagaaacggaaatggct
gaatatctagaaattagtgttcagcaactgcgtcaactacaacaactgcgtcgtcaagca
ttatctttaaaccaccgtgttggtaaggaagaagacacggaattaatggacttgttggag
gatgaggataaccaatctccagaagcaaaaatgaatgaaaacatgatgcgtcaggagata
tgggaagttttaggtgatgtcctcacccccagggaaaaagatgtcatttctttacgctat
ggacttacaactagcgaaccttgcactctcgaagaagtgggtaatatgtttaacctctcc
cgtgaacgagtgcgacaaattcaaagtaaagccatgcgcaagttacgccgtccccatatc
gctaaacgtttaaagggttggttaatttaa
DBGET
integrated database retrieval system
