Okeanomitos corallinicola: WJM97_17085
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Entry
WJM97_17085 CDS
T10416
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ocf Okeanomitos corallinicola
Pathway
ocf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJM97_17085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocf02000
]
WJM97_17085
Transporters [BR:
ocf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
WJM97_17085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_21
AAA_16
ATP-synt_ab
Mg_chelatase
AAA_29
AAA_5
NACHT
PRK
MobB
EspG
Motif
Other DBs
NCBI-ProteinID:
WZB87083
LinkDB
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Position
3919286..3921166
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AA seq
626 aa
AA seq
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MREIFLEVRNLQVEFSGDGSQVKAVDGISFNLCRGETLGIVGESGSGKSVTALAIMGLLQ
YPGQVSEGEILFRPQENAKPMDLLALPAEEMQLYRGGDIAMIFQEPMSSLNPVYNIGFQL
TEAIMRHQNVTLAEAKRIAISGLQEVKLLPSDENIQAQYLNNWHFTNPQTPLPNDFQLAQ
LVKEHKSAMLARFPHELSGGQLQRVMIAMAISCNPSLLIADEPTTALDVTVQATIIELMG
ELQASRDMGMIFISHDLGLVSEIADYVAVMYKGKIVEYGAAEQIFSHPQHPYTKGLVACR
PSLDSRPHKLLTVSDYMNVEEDGDGRVVIKPQEPSAPREVTREEIHTRLENITSQKPLLE
INNLKVGFPIRGVFGGTKRYHLAVNDVSFHVFPGETLGLVGESGCGKTTLGRTLLRLIEP
MAGKIIFDDQNITNLKGNTLQKLRREMQIVFQNPFSSLDPRMKIGNAVIEPLLIHAVGKT
KKQRRDRAVELLERVGLSADDMNRYPHQFSGGQRQRVCIARSLALNPKFIICDESVSALD
VSVQAQVLNLLKELQQEFNLTYIFISHDLSVVKFMSDRILVMNQGKIVESGTAENIYLQP
QQEYTQKLIAAIPTGNPERVKNKNLN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatatttctagaggttcgcaatctacaagttgaattttccggtgatggtagt
caggttaaagctgtggatggtatcagctttaatttatgtcgaggggagactctaggaatt
gtgggagagtctggaagcggtaaatcggtgacagcgttagctattatgggtttgttgcaa
tatcccggtcaggtgagtgagggagaaattttatttcgtccccaggaaaatgctaaaccg
atggatttgttagctttacctgcggaggaaatgcaactctatcggggtggagatattgcg
atgattttccaagaaccaatgagttctttaaacccggtttataatattgggtttcagcta
acagaagcaattatgagacatcaaaatgtgactttagctgaagctaaaagaattgctatt
tcaggtttacaagaagttaaacttttaccaagtgatgaaaatattcaagcacaatattta
aataattggcattttaccaacccacaaacacctttacctaatgattttcagttagcgcaa
ttagtgaaggaacacaaatcagcaatgttagcacgtttccctcatgaattgtctggaggt
cagctacaaagggtcatgattgctatggcaatttcttgtaatccatcattattaattgca
gatgaaccaactacagctttggatgtaaccgtccaagcaacaattattgaattgatggga
gaattacaagcaagtcgtgacatgggaatgatttttattagtcatgatttggggttagtt
tcagaaattgctgactatgttgcagttatgtataaaggtaaaattgtggaatatggtgca
gcagaacaaatttttagtcatcctcaacatccatatacaaaaggtttagtcgcttgtcgt
ccttctcttgatagtcgtccccataaattactgacagtttctgattatatgaatgtggaa
gaagatggagatggtagagtcgtaattaaaccccaagaaccatctgcaccaagggaagta
accagggaagaaattcatacaagattagaaaatattacctctcaaaaaccacttttagaa
attaataatctgaaagttggttttcccattcggggtgtttttggaggaacgaaacgttat
catcttgctgttaatgatgtttcttttcatgtttttccgggagaaactttaggattagtg
ggtgaatctggttgtggtaaaacaactttggggagaactttactcaggttgattgaacca
atggctggtaaaattatttttgatgatcaaaatatcactaatctcaagggaaatacatta
caaaaattacgtcgagaaatgcaaattgttttccaaaatccctttagttctcttgacccc
agaatgaaaattggtaatgcagtaatagaacctttattaattcatgctgttggtaaaact
aaaaaacaaagaagagatagagcggtagaattattagaaagggtgggattaagtgctgat
gatatgaaccgctatcctcatcaattttccggtggacaaagacaaagggtttgtattgca
cgttccttagctttaaaccctaaatttattatttgtgatgagtcggtttccgctttagat
gtttctgtccaagcacaggttttaaacctattaaaagaactgcaacaagaatttaacctc
acctatattttcatttcccatgatttaagtgtggtcaaatttatgagcgatcgcattttg
gtcatgaatcaaggtaaaatagtagaatctggtacagcggaaaatatttacctgcaaccg
caacaagaatatacacagaaattaattgcagcaattcctacaggtaatcctgaaagagtg
aaaaataaaaatttgaattaa
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