Okeanomitos corallinicola: WJM97_22155
Help
Entry
WJM97_22155 CDS
T10416
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocf Okeanomitos corallinicola
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocf03032
]
WJM97_22155 (topA)
03400 DNA repair and recombination proteins [BR:
ocf03400
]
WJM97_22155 (topA)
Enzymes [BR:
ocf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WJM97_22155 (topA)
DNA replication proteins [BR:
ocf03032
]
Prokaryotic type
DNA Topoisomerases
WJM97_22155 (topA)
DNA repair and recombination proteins [BR:
ocf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WJM97_22155 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WZB88018
LinkDB
All DBs
Position
5023035..5025194
Genome browser
AA seq
719 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGTDWIVRASCGHIRELSNEGEDSLGFTMIGNNVNCKYIP
RDQRAKETIQKLKAAVKQVDEVILATDPDREGETIAWHLKETLGLREPKRVVYTEITASA
VKAAISHPRKLDSNLIGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQIFVPQDYWSVWVDYKEGFRAFYKGTANTLTETPESETQTHDDAATNNPEKPESK
RVLSAAEADKLVAEAKQHPHKVIQIEGKLTYRQPPPPFTTSTLQQAAGSKLKFAPEKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCASARKWLEEHDPQNIPQQVAKYRSSKTAQEAHEA
IRPTDVFRPSVQLRVELPEDEFNLYVMIWKRAVASQCRPAQVRKTLIITQSGNILWQARG
QVVEFYGYAKYWPNLGKDAVLPILQQGQKLTLENAGHEKKQTQPPPRYSEPKLVQLMERK
GIGRPSTYAPTVATLKKRNYIELKKGNLHPTTLGLEVDEFLQKALPDLLEAEFTAKMEAE
LDKIAEGKNSWQNYLTTWNQSYFVPALSKAKTVVVNVGNTAKTNGKFERKYESSKTKCPE
CSNFLAKIPSSKVKKKYFLKCVSGCENIVLFWSDFNKRWEAPKTKTSATENTPKPAAKIT
SYPCPVCKKPLEEYSYIKDGQNKTMLRCSGQDSWKDKKHKDAAYFYTAKGWWSPKFGNL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcctcctagttgttgaatcgcccggaaaagtcaaaaaactgagtcaaatt
ctcggtacagattggatagttcgcgctagttgtggacatatccgcgaactcagtaatgag
ggtgaagattcgctaggattcacaatgataggtaacaatgttaattgcaaatatatcccc
cgtgaccaacgcgctaaagaaacaattcaaaaacttaaagccgctgtcaaacaagttgat
gaagtcattttagcaacagacccagatagagaaggagaaaccattgcttggcatctcaaa
gaaaccctgggattacgagaacccaagcgagtagtttatacagagattacagcatcagcc
gtaaaagccgcaatttcccatcctcggaaacttgactctaacttaatcggtgcaggatta
tgcagagattgtcttgataagttggtaggatacaaaggtagtcccctagtttgggcatta
aacaacggtgcaaaaagtgtaggtagagtccaaagcgccacattacacctcatttgtcag
cgcgaaagagaaattcaaattttcgttccccaagattactggagtgtgtgggtagactac
aaagaaggatttcgggctttttacaaaggtacagctaataccctcacagaaacaccagaa
tcagaaacccaaacccacgatgatgcagctacgaataaccccgaaaaaccagagtctaag
agggttttatcagcagcagaagcagataaattagttgcagaagctaaacaacatcctcac
aaagtcatccaaattgaaggtaaactcacctatcgtcaaccacccccaccatttaccacc
tccaccctacaacaagcagccgggtctaaactgaaatttgccccagaaaaaaccatgcag
gtggcacaaaagctatatgaggcagggttgataacatatatgcgtacagattcagtcatg
ctaagtcctgaattttgcgccagtgcgcgtaagtggttggaagaacatgacccccagaat
ataccccaacaagtagctaaataccgtagtagtaaaacagcacaggaagcacacgaagcg
attcgtcctacagatgtgtttcgtccttcggtacagttgcgggtagaattacctgaagat
gagtttaacctgtatgtgatgatttggaaaagggcagttgcttctcaatgtcgtcctgca
caggtgagaaaaactttaattattacccaatcaggtaatattttatggcaagcgagggga
caagttgtagagttttatggttatgcgaaatattggcctaatttgggtaaagatgcggtt
ttaccaattttacaacaggggcaaaaattaactttagaaaatgccggacatgaaaagaaa
caaacccaaccaccaccaagatacagtgaaccaaaacttgtacaattaatggaaagaaaa
ggtattggtcgtcctagtacctacgcgcctacagttgcgactttaaagaaacgtaattat
attgaattaaaaaaaggtaatcttcatcctacaactttaggtttagaagttgatgagttt
ttacaaaaggcattaccagatttattagaagcagaatttaccgccaagatggaagcggaa
ttagataaaattgctgaaggtaaaaattcttggcaaaattatttaactacttggaatcaa
agttattttgtccctgcactttctaaagctaaaactgtggttgttaatgtaggaaatacg
gctaaaactaatggtaaatttgagcgtaaatatgaaagttcaaaaactaaatgtcctgaa
tgtagcaactttttagcgaaaattcctagtagtaaggtgaagaagaaatattttcttaaa
tgtgtgagtggttgtgaaaatattgttttgttttggagtgattttaataaacgttgggaa
gcaccaaaaacaaaaacatcggcaacagaaaatactcctaagccagcggctaaaataaca
tcttatccctgtccggtatgtaagaaacctttagaggagtatagttatattaaagatggg
cagaataaaaccatgttgcggtgttctggtcaggattcttggaaggataaaaaacataag
gatgcggcttatttttatacagcaaaagggtggtggagtcctaaatttgggaatttgtag
DBGET
integrated database retrieval system
