Afipia carboxidovorans OM5 (Goettingen): OCA5_c00250
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Entry
OCA5_c00250 CDS
T01617
Symbol
nusA
Name
(GenBank) transcription elongation protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocg03021
]
OCA5_c00250 (nusA)
03009 Ribosome biogenesis [BR:
ocg03009
]
OCA5_c00250 (nusA)
Transcription machinery [BR:
ocg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OCA5_c00250 (nusA)
Ribosome biogenesis [BR:
ocg03009
]
Prokaryotic type
rRNA transcription factors
OCA5_c00250 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
S1
KH_NusA_C
KH_1
RAD51D_N
Prot_ATP_ID_OB_C
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AEI04759
UniProt:
B6JCS6
LinkDB
All DBs
Position
26266..27891
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AA seq
541 aa
AA seq
DB search
MAAVSANKLELLQIADAVAREKSIDRSIVIAAMEDAIAKAARARYGSETDVHAEIDSKKG
ELRLSRHMLVVETVENPANQISLEDAKRANPTAQIGDTIADTLPPLEYGRIAAQSAKQVI
VQKVREAERDRQYQEFKDRIGEIVNGIVKRVEYGSVIVDLGRGEAIVRRDEMLPREALRN
GDRIRAYIFDVRRETRGPQIFLSRTHPQFMAKLFAQEVPEIYDGIVEIKAVARDPGSRAK
IGVISRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWSPDIATFVVNALAPAEVAK
VVIDEDRERIEVVVPDTQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQADFENS
TRVFMEALNVDEVVGQLLASEGFSSVEELVLVDVRELAGIEGFDEETANELQSRAREYLE
HLEAELEAKRKELGVEDAMKDVPGITGKILVKLGENDVKTVEDLAGCATDDLVGWTERKD
GETVKHDGFLDASETSRDEAEALIMQARLAAGWITEADLAKPSDDEEAADGDDAASEAHP
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtcagcgccaacaagctcgaactgctgcaaatcgccgacgccgtcgcgcgc
gaaaaatcgatcgatcgttcgatcgtgatcgccgcgatggaagacgctatcgcgaaagca
gcgcgggcccgttacggctcggaaaccgacgttcacgcggagatcgattccaagaagggc
gagcttcgcctgtcgcggcacatgctggtggtcgagactgtcgagaatcccgcaaaccag
atttcgctcgaagacgccaagcgcgccaacccgaccgcgcagatcggcgacaccatcgcc
gacacgctgccgcccctggaatacggccgcatcgccgcacagtcggcaaagcaggtgatc
gtgcagaaggtgcgcgaggccgagcgcgaccggcagtatcaggaattcaaggatcgcatc
ggcgagatcgtcaacggcatcgtcaagcgcgtcgaatacggcagcgtcatcgtcgatctc
ggacgtggtgaagccatcgtgcgtcgcgacgaaatgctgccgcgcgaggcgctgcgcaac
ggcgaccgcatccgcgcctacatcttcgatgtacgccgggaaacccgcggaccgcagatc
tttctgtcgcgtacccacccgcagttcatggcgaaactgttcgcgcaggaagtgccggaa
atctatgacggcatcgtcgagatcaaggctgttgcccgcgatcccggctcgcgcgccaag
atcggcgtgatctcgcgcgattcctcggtcgatccggtcggcgcctgcgtcggtatgcgc
ggctcgcgcgtgcaggccgtggtgaacgaactgcagggcgagaagatcgacatcattccg
tggtcgcccgacatcgcgaccttcgtcgtcaacgcgctggcgccggcggaagtcgccaag
gtcgtcatcgacgaagaccgcgagcgcattgaagttgttgtgcccgatacccaattgtct
cttgcgatcggccgccgcggtcagaacgtgcggcttgcctcgcagctcacgggctgggac
atcgacatcctgaccgagcaggaagaatcggaacgccgtcaggcagatttcgagaattcc
acgcgtgtcttcatggaagcgctcaacgtcgacgaagtcgtcggccagttgctggcttcg
gaaggcttttcctccgttgaggaactcgttctggtcgacgtgcgcgagctcgccggcatt
gagggtttcgacgaggaaaccgcgaacgaattgcagagccgcgcccgcgaatatctcgag
catctcgaagccgagctcgaggcgaagcgcaaggaactcggcgtcgaggacgccatgaag
gacgttccgggcatcaccggcaagattctggtgaaactcggcgaaaacgacgtcaagacg
gttgaggatctcgccggctgcgccaccgacgatctcgtcggctggaccgagcgcaaggat
ggcgagaccgtcaagcatgacggcttcctcgatgcgagcgaaacctcgcgcgacgaggcg
gaagccttgatcatgcaggcgcgccttgcggctggctggatcaccgaggccgacctcgcc
aagccgtcggacgacgaagaagctgcggacggcgacgacgccgcttccgaagcccatccg
gcctga
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