Afipia carboxidovorans OM5 (Goettingen): OCA5_c02300
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Entry
OCA5_c02300 CDS
T01617
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit SdhB
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00020
Citrate cycle (TCA cycle)
ocg00190
Oxidative phosphorylation
ocg00650
Butanoate metabolism
ocg00720
Other carbon fixation pathways
ocg01100
Metabolic pathways
ocg01110
Biosynthesis of secondary metabolites
ocg01120
Microbial metabolism in diverse environments
ocg01200
Carbon metabolism
Module
ocg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ocg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ocg_M00149
Succinate dehydrogenase, prokaryotes
ocg_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCA5_c02300 (sdhB)
00650 Butanoate metabolism
OCA5_c02300 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
OCA5_c02300 (sdhB)
00720 Other carbon fixation pathways
OCA5_c02300 (sdhB)
Enzymes [BR:
ocg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OCA5_c02300 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer2
Fer4_7
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
AEI04959
UniProt:
B6JAS6
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All DBs
Position
complement(247086..247868)
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AA seq
260 aa
AA seq
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MVEFALPKNSTISSGKTWPKPEGATETREYHIYRWSPDDNQNPRIDTYYVNTADCGPMIL
DGLIWIKNHIDPTLTFRRSCREGVCGSCAMNIDGQNTLACTCAASDVASGPITIRPLPHQ
PVVKDLVPDLTNFYAQYASIEPWLHTTTATPQKEWRQSIEERRELDGLYECILCACCSTS
CPSYWWNSDRFLGPAALLAADRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCTKACPK
GLNPSKAIADLKRKLVERQV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggttgaattcgcgctgccgaaaaactccaccatctcgagcggcaagacatggccgaag
cccgaaggcgccaccgagacgcgcgaatatcacatctatcgctggtcgcccgacgacaac
cagaacccgcgcatcgacacctattacgtcaacaccgccgattgcggcccgatgatcctc
gatggactgatctggatcaagaatcacatcgatccgacgctgaccttccgccgctcctgc
cgcgaaggcgtctgcggctcctgcgcgatgaacatcgacggccagaacacgcttgcctgc
acctgcgcagcaagtgacgtcgcgagcgggccgatcacgatccggccactgccgcatcag
ccggtggtgaaggatctcgtccccgacctcaccaacttctatgcgcagtacgcttcgatc
gagccgtggctgcacaccacgactgcgacgccgcagaaggaatggcggcagtcgatcgag
gagcgccgcgaactcgacggcctctacgaatgcatcctgtgcgcctgctgctcgacctca
tgcccgagctactggtggaatagcgatcgcttcctgggcccggccgcgctgcttgccgcc
gatcgctgggtgaaggattcgcgcgacgaagcaaccggcgagcggctcgacaatctcgag
gacccgttccggctttatcgctgccacaccatcatgaactgcaccaaggcgtgcccgaag
ggattgaatccctccaaggcgattgccgatctcaagcgcaagctggtcgagcggcaggtc
tga
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