Afipia carboxidovorans OM5 (Goettingen): OCA5_c04450
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Entry
OCA5_c04450 CDS
T01617
Name
(GenBank) helicase domain protein
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ocg03029
]
OCA5_c04450
Enzymes [BR:
ocg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OCA5_c04450
Mitochondrial biogenesis [BR:
ocg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OCA5_c04450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DUF5131
Dynein_C
Motif
Other DBs
NCBI-ProteinID:
AEI05170
UniProt:
F8BVB0
LinkDB
All DBs
Position
465868..469182
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AA seq
1104 aa
AA seq
DB search
MKHQLPSISSRSDRAPGAGVTAVLGPTNTGKTHLAIERMLAHSSGLIGLPLRLLAREVYN
KIVARAGAEQVALITGEEKIKPPNARYWVSTVEAMPRELDVSFLAVDEIQIAADLERGHV
FTDRILNRRGRDETLLLGAATMRPLIERLLPGANIVTRPRLSLLEFAGDRKITRQPRRTA
IVAFSADEVYAIAELIRRQHGGAAVVLGSLSPRTRNAQVEMFQSGDVDYLVATDAIGMGL
NLDVDHVAFASDYKYDGYQFRRLTPAEFAQIAGRAGRATRNGTFGTTGRCAPFEPELVNA
LQNHLFDSVKMLQWRNTALDFSSLAALQVSLALAPEHQALTRAPLGEDQRVLEHAARDPD
VRDMATDSASVERLWETCLVPDYRKLSPAAHAELVTTLFSFLMRKGRIPDQWFAAQVAQA
DRVDGGIDTLSARISQIRTWTFAANRPDWLSDPLHWQETTRAVEDKLSDALHSRLTERFV
DRRTSVLMRRLRENMMLTTEIGKTGEVTVEGHVIGRLDGFMFAPDAAEAGSEAKALQATA
LKALAGEIDARAEKLSAAADDQFALASDGTLRWTGDAVGKLVAADEVLHPRIRIIADERL
TGASRDAVQARLDLWLKTHIEKILGPMFELSKAEDVTGIARGIAFQLVEALGVLERPKIA
AEMKDLDQPSRAVLRKYGVRFGAYHIFFPALLKPGARTLASLLWALKEDNVDMNALGGAQ
HLAASGRTSFPADKTLSNDAYRVLGYRLAGERVVRVDILERLADLIRPALAWRPGTGMEK
PAGAFDGRSFTVTQAMTSLTGSAGEDFASVLRSLGYRMDRRAPLPEEPKPEASTEVASTE
TTSAEAASESTPPVEASTEAAAGESATASESAASDEAAVAADAHVESVEASSAAKLPDVE
FAPTEAPAQEAASSVEPAPSAESSSPDEAASTDAPSAEAASANTATETADAVAAPAEPEL
VEVWRPAGRHDERRGRHERHRRHHRHGSAASAAAADAAAEGGEKKERPARRHDRSREDRR
QRPEGEGAQARGPKDERNEAGRERAKGRRGKFEGKRDGRDRKDGGPAFRTFATSAPRERE
RTADPNSPFAKLAALKEQLGTRKD
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaccagctcccttcaatctccagtcgaagcgatcgtgcaccgggtgcgggtgtc
actgctgtgctcggcccgacgaacaccggcaagacgcatcttgcgatcgagcggatgctt
gcgcattcctccggcctgattggcttgccgctgcggcttctggcgcgcgaggtctacaac
aagatcgtcgcccgcgcgggcgcggagcaggtcgcgctgatcaccggtgaggagaagatc
aagccaccgaatgcgcgctactgggtgtcgaccgtcgaggcgatgccgcgcgaactcgac
gtgtcgtttctcgccgtcgatgaaatccagatcgccgccgatcttgagcggggtcacgtc
ttcaccgaccgcattctcaaccggcgcggccgcgatgagacgctgctgctcggcgccgcg
acgatgcggcctttgatcgagcggcttctgcccggcgccaatatcgtgacgcggccgcgt
ctgtcgctgttggaatttgcgggcgaccgcaagatcacgcgccagccgcgccgcacggcg
atcgtcgccttctctgccgatgaggtttacgcaatcgccgaattgatccgccgccagcac
ggcggtgcggctgtggtgctgggctcgttgtcgccgcgcacgcgcaatgcgcaggtggag
atgttccagtccggcgatgtcgattatctcgtcgcgaccgacgccatcggaatgggcctc
aaccttgatgtcgatcatgtcgccttcgcatccgactataaatatgacggttatcaattc
cgtcgcctgacgcctgcagaattcgcgcagattgcaggccgcgccggccgtgccacgcgc
aacggcacgttcggtaccacgggacgctgcgcgccgttcgagcccgaactcgtcaacgca
ctgcagaaccacctgttcgacagcgtgaagatgctgcaatggcgcaatacggcgctcgac
ttttcctcgctcgcggcgctgcaggtgtcgcttgcgctcgcgccggagcatcaggcgctg
acgcgcgcgccgcttggtgaggatcagcgcgtgctggaacacgccgcgcgcgacccagat
gtgcgcgatatggcgacggattccgcctcggtcgaacggctctgggaaacctgcctggtt
cccgattaccgcaagctgtcaccggcggcacatgctgagctggttacaacgctattctcg
ttcctgatgcgaaagggccggattccggatcaatggtttgcggcgcaggtggcgcaggcg
gatcgggtggatggcggtatcgacaccctgtccgcgcggatttcacagatccggacctgg
acctttgccgcaaaccggccggactggctgtccgacccactccattggcaggaaacgacc
cgtgcggtggaagataaattgtcggatgcattgcattcgaggctaacggagcgtttcgtt
gatcgccggaccagtgtattgatgcgccgcttgcgggaaaacatgatgctgacgactgaa
attggaaagaccggcgaagtcactgttgagggccatgtcatcggccgtctcgacggattt
atgttcgcccccgatgccgctgaggcaggctcggaagcgaaggcgctgcaggcgactgca
ctgaaggcgctggccggggaaatcgacgcgcgcgcggagaagctctctgctgccgccgac
gatcagttcgcgcttgcctccgacggcacgctgcgctggaccggcgatgcggtcggcaag
cttgtcgccgccgacgaggtgctgcatccgcgcatccgcattatcgccgatgagcgcctc
accggtgcttcgcgtgacgccgtgcaggcgcggctcgatctctggctcaagacgcatatc
gaaaaaattctcgggccgatgttcgagctctccaaggccgaggacgtcaccggcattgcg
cgcggcattgccttccagctcgtcgaggcgctcggcgttctggagcggccaaagattgcg
gccgagatgaaggatctcgatcagccctcacgcgccgtcttgcgtaaatacggcgtgcgc
ttcggcgcctatcacatcttcttcccggcgctgctcaagcccggcgcgcgcacgctcgcc
tcgctgttgtgggcgctgaaagaggacaatgtcgatatgaacgcgctcggcggcgcgcag
catctcgcagcgagcggccgcacctcgttcccagccgacaagacattgtcgaacgatgcc
tatcgcgtgctgggttacaggctcgcgggcgagcgcgtggtgcgcgtcgatattctcgag
cgtctcgccgatctcattcgtcccgctttggcgtggcggcccggcaccggcatggagaag
cctgcaggtgcgttcgacggccgttcgttcaccgtgacgcaggcgatgacctcgctcacc
ggttcggcgggtgaggacttcgcctcggtgttgcgttcgctcggttatcgtatggatcgc
cgtgcgccgctgccggaagaaccgaagccggaagcatctaccgaagttgcttccactgag
acgacttctgcggaggctgcatccgagagcacgccacctgttgaagcttcgaccgaagcc
gccgcaggcgagtccgctaccgcaagtgaatctgctgcatctgatgaggctgcggtggct
gcggatgctcacgttgaaagcgttgaggcttccagcgcagcgaagttgcctgacgttgag
ttcgcaccgactgaggctcctgcgcaggaggcggcttccagtgttgagcccgcgccttcc
gccgaatcttcttccccagacgaggctgcttccaccgacgctccttccgctgaagctgca
tcggcaaacaccgcgacggaaacggcagacgctgttgccgcgcctgcggagcccgagctt
gtcgaggtgtggcgtcctgcgggccgccacgatgaacgtcgcggacggcatgagcgccat
cgccggcatcaccgccatgggtcggcagcgtctgctgctgcagcggatgcagcggctgaa
ggcggcgagaaaaaggaacgccccgcgcggcggcacgatcgttcccgcgaggatcgccgc
cagcggccggagggagagggtgcgcaggcgcgcggcccgaaggacgagcgtaacgaggca
ggacgcgagcgcgcgaagggccgccggggcaagttcgaaggcaagcgtgacggccgcgac
cgcaaggatggtggtcccgcgttccgcaccttcgcaaccagcgccccgcgggaacgcgaa
cgcactgccgatccgaattcgccgttcgcaaaattggccgcgctcaaggaacagctcggc
acccgtaaagattga
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