Afipia carboxidovorans OM5 (Goettingen): OCA5_c05320
Help
Entry
OCA5_c05320 CDS
T01617
Name
(GenBank) transcriptional regulator, LysR family
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
SBP_bac_11
PBP_like_2
HTH_Tnp_4
HTH_24
HTH_AsnC-type
HTH_30
HTH_34
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AEI05256
UniProt:
F8BWB8
LinkDB
All DBs
Position
556614..557807
Genome browser
AA seq
397 aa
AA seq
DB search
MNPVYENMGEAVVAISVALTDVSNARKPETTTNFGAGGFPSSNNEWVGKGIDADERSRLA
DGDESAKRSETSISQNPREQNRISIQESFARGGSPLGSRITLTALIQTLAVAEYLNFRHA
ANALGVSQSSISERIKALEDTFGIPLFERHARGVKLTDAGRCFVERVAISVAQLDHAVKT
IGMMARGDRGRLRIGVHALIPGSFLTEVIGQYHAQYPDVDVEIAEGTASEVVSQLRAGRL
DVAFVAGTPEYPDLHSTCIWTEPLVVALPANHPLVDRNGITWADLAGEAFLVRYGGTGPQ
VHDHILLRLAGRWLSPSILRLAVERGSLLSMIAQGYGVTIAGSAHTLIRPPGVVFLPFLD
EPEPVPFSGVWSPHNRSAVLRNLLDLANQMSRGARTP
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtctacgagaatatgggcgaggctgtcgtcgctatatccgtcgccctcact
gacgtctccaatgcccgtaaaccggagacgacgacaaatttcggtgctggtggttttccg
tcgtcgaacaacgagtgggtagggaaagggattgatgccgatgagcggtcgaggctcgcg
gacggtgatgagtccgccaagcgctctgaaacttcgatctctcaaaatccgcgagaacag
aatcgaatatcgattcaggaaagtttcgcgcggggtggttcgccgctcgggtcgcgcatc
acgctgacggcgctaattcaaactctagcagtcgccgagtatctgaatttccgccatgcg
gcgaatgcactgggcgtcagtcagtcgagcatcagcgagcgcatcaaagctcttgaagac
acgtttggcatcccgctattcgagcgtcatgctcgcggcgttaagctaaccgatgctgga
cgatgtttcgtcgagcgggtggcgataagcgtcgcgcagctcgaccatgccgtgaaaacg
atcgggatgatggcgcggggcgaccgtggccggttgcgtatcggtgttcatgcgctcatt
cccggcagctttctgaccgaggtgatcggccagtatcacgcgcagtatcccgacgtcgac
gtggagatcgccgaagggacggcatccgaggtggtgagccaactgcgcgccggtcgtctc
gacgtggcgttcgtcgccggcacgccagaatatcccgatttacactcgacatgcatctgg
accgagccgctggtggtcgcgctgccggccaaccatccgctcgtcgaccgcaatggtatc
acctgggccgatctggcgggtgaagcctttctagtccgctatggcggcacgggaccgcag
gtacatgaccatatcctgctgcgtttggctgggcgctggctctctccgtcgatccttcgc
cttgctgtcgagcgcggctcgctgctgtcgatgattgcgcaaggctacggcgtgacgatc
gctgggagcgcgcatacacttattcgacctcccggcgtcgtattcctgccgttcctcgat
gagccggagccggtgccgttctcaggggtctggtcgccgcacaatcgcagtgcggttcta
aggaatctgctcgatctcgcaaaccagatgagccgaggtgctcgcaccccatga
DBGET
integrated database retrieval system
