Afipia carboxidovorans OM5 (Goettingen): OCA5_c05950
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Entry
OCA5_c05950 CDS
T01617
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg03030
DNA replication
ocg03430
Mismatch repair
ocg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCA5_c05950 (dnaX)
03430 Mismatch repair
OCA5_c05950 (dnaX)
03440 Homologous recombination
OCA5_c05950 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocg03032
]
OCA5_c05950 (dnaX)
03400 DNA repair and recombination proteins [BR:
ocg03400
]
OCA5_c05950 (dnaX)
Enzymes [BR:
ocg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCA5_c05950 (dnaX)
DNA replication proteins [BR:
ocg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCA5_c05950 (dnaX)
DNA repair and recombination proteins [BR:
ocg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCA5_c05950 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_18
AAA_30
AAA_5
AAA_14
AAA_2
AAA_24
AAA_19
AAA_assoc_2
nSTAND3
SKI
Rad17
Glyco_tranf_2_5
SRP54
AAA_28
TsaE
RCF1-5-like_lid
CbiA
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AEI05319
UniProt:
B6JJQ3
LinkDB
All DBs
Position
621749..623647
Genome browser
AA seq
632 aa
AA seq
DB search
MPDSDLSGLSAGDQADQQAGDQAGLGFAEPAAVERPAVASGYRVLARKYRPSNFDDLIGQ
EAMVRTISNAFETGRIPQAWILTGVRGVGKTTTARILARALNYELPDGSAKGPSIAMPVP
GVHCQAIMESRHIDVLEMDAASHTGIDDVRQITDGVRYAPSSARYKVYIIDEVHMLSEKA
FNAFLKTLEEPPEHAKFVFATTEIRKVPVTVLSRCQRFDLRRVDAEVLMTHLANIVTREG
VEAEPEALGLIARAAEGSVRDSLSLLDQAIAHAAGLVRAEDVRQMLGLADRTRVIDLFEH
LAKGDIASAFAEFREQYDTGADPVVVLSDLAEFVNFVTRVKVVPATADNVALGEAERTRG
REFATKLSMRVLSRMWQMLLKGIAEVQNATRPQAAAEMVLVRVAYVADLPTPDEAIKMIG
ENGGAGSVPSVAPIGGAAPRSPAMSAPTSVSRGPAPAPRTMPPARAANETIARQQPRPVE
SVAPQSAPVLRLSTYADIVELAREKRDVQLKTALEADLRLVRMEDGKLEIALERSAARSV
VNELQRKLEQWTGRRWAVIVSNEEGEPTLRAQARERKDKLTEDVQADPRVQAVMTLFPGT
EVVDVRRLAPEPPAAMPAGDESADGFDDDDDV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccgacctctcaggcctgagtgcgggcgaccaggccgatcagcaggccggc
gatcaagcgggtcttggttttgcggagcccgcagccgtcgagcgtcccgcggtcgcctcg
ggctaccgcgttctggcgcggaagtatcgtccctcgaatttcgacgacctgattggccag
gaagccatggtccgcaccatctcgaatgcgttcgagaccgggcggattccgcaggcctgg
attctcaccggcgtgcgcggcgtcggcaagaccacgactgcgcgcatcctcgcccgcgcg
ctgaattacgaattgccggatggctcggcgaaagggccgagcatcgcgatgccggtgccg
ggcgtgcattgccaggcgatcatggaaagccgtcacatcgacgtgctggagatggacgcg
gcctcgcacaccggcatcgacgacgtgcgccagatcaccgacggcgtgcgctatgcgcca
tcgagtgcgcgctacaaggtctacatcatcgacgaagtccacatgctgtcggagaaggcg
ttcaatgccttcctcaagacgctggaggagccgccggagcacgccaagttcgtgttcgcg
actactgagattcgcaaagtgccggtcacggtgctgtcgcgctgccagcggttcgacctg
cggcgtgtcgatgccgaggtgctgatgacgcatctcgcaaatatcgtgacgcgtgaaggc
gtcgaggcggagccggaagcgctcggcctgattgcgcgcgcggcggaaggctcggtgcgc
gactcgctctcgctgctcgatcaggcgattgcgcatgcggcaggcctcgtgcgcgccgag
gacgtgcgccagatgcttggtcttgccgaccgcacgcgggtgatcgatctgttcgaacat
ctcgcgaagggcgatatcgccagcgcctttgccgaattccgcgagcaatatgacaccggg
gccgatccggtcgtggtgctgagcgatctcgctgagttcgtgaacttcgtcacccgtgtg
aaggtggtgcccgcgacggcggacaacgtcgcgctcggcgaagcggagcgcacgcgtggt
cgcgaattcgcaaccaagctgtcgatgcgcgtgctgtcgcggatgtggcagatgctgctc
aagggcattgcggaggtgcagaacgcgacgcgcccgcaggctgcggccgaaatggtgctg
gtgcgcgtcgcctacgtcgccgacctgccgacgcccgacgaagcgatcaagatgatcggt
gaaaacggcggcgcagggagcgttccttctgttgcgcccatcggcggtgccgcgccgaga
agccccgcgatgtctgcgcccacatcggtttcgcgtggtcctgcgcccgcgccgcgcacc
atgccgcctgcgcgggctgcaaatgaaaccatcgcgcgccagcagccgcgaccggtggag
tcggtcgcgccacagtccgcgccggtgctacggctttcgacctacgccgacattgtcgaa
ctcgcgcgcgagaagcgcgacgtgcagctcaagaccgcgcttgaggccgatctgcggctg
gtgcgtatggaagacggcaagctcgagatcgcgctcgagcgcagtgccgcgcgctcggtg
gtcaacgagttgcagcgcaagctcgagcaatggaccggccgccgctgggcggtgatcgtg
tccaatgaagaaggcgagccgacgctgcgcgcgcaggcgcgcgaacgcaaggacaagctg
accgaagatgtgcaggccgatccgcgcgtgcaggcggtgatgacgctgttcccgggtacc
gaggtggtcgacgtgcgccgtcttgcgccggagccgcccgcggcgatgcctgcaggcgat
gagtccgccgatggcttcgacgatgacgacgacgtttaa
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