Afipia carboxidovorans OM5 (Goettingen): OCA5_c06020
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Entry
OCA5_c06020 CDS
T01617
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocg03016
]
OCA5_c06020 (truA)
Enzymes [BR:
ocg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
OCA5_c06020 (truA)
Transfer RNA biogenesis [BR:
ocg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OCA5_c06020 (truA)
Prokaryotic type
OCA5_c06020 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AEI05326
UniProt:
B6JJP6
LinkDB
All DBs
Position
629157..629894
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AA seq
245 aa
AA seq
DB search
MPRYKLLIEYDGTPFCGWQYQDNGPSVQGALEDAVAALAGTHVRVHGAGRTDAGVHALGQ
VAHIDLEKSYRTDQVRDALNAHLRPHPIGVLSAEIVPETFESRFSAVKRHYIYRISNRRA
NLALDLHRAWRIARTLDVAAMHEAAQVLVGRHDFTTFRDTECQAKSPEKTLDQLDVTREG
DAVSIVTSARSFLHSQVRSMVGSLVWVGHGRWTIADMRNALAARDRTACGPVAPPEGLYL
VRVDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctacaagctcctcatcgaatatgacggcacgccgttctgcggctggcagtat
caggacaacggcccctccgtgcagggcgcactggaggatgccgtcgccgcgctggcgggc
acgcacgtgcgtgttcatggcgcggggcgcaccgacgccggagtgcatgcactggggcag
gtcgcgcatatcgatctcgagaaatcctatcgtaccgatcaggtgcgtgatgcgctcaac
gcccatctgcggccgcacccgatcggcgtgttgtcagcggagatcgtgccggagacattc
gagtcgcgcttctcagcggtgaagcggcattatatctatcgcatcagcaatcggcgagcc
aacctcgcgctcgatcttcatcgtgcgtggcgtatcgcgcggacgctcgatgtcgcggcg
atgcacgaggctgcgcaggtgctggtcggccggcacgatttcacgacgtttcgtgacacc
gaatgtcaggcgaaatcgccggaaaagacgctcgatcaactcgacgtcacgcgtgagggc
gatgcggtgagcatcgtcacctcggcccgctcgttcctgcacagccaggtgcgttcgatg
gtcggctcgctggtgtgggtcggtcacggccggtggaccatcgccgacatgcgcaatgcg
ctcgctgcgcgcgaccgcaccgcgtgcggcccggtggccccgccggaaggattgtatctg
gtgcgggtggattattga
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integrated database retrieval system
