Afipia carboxidovorans OM5 (Goettingen): OCA5_c07210
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Entry
OCA5_c07210 CDS
T01617
Name
(GenBank) RNA polymerase sigma factor protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocg03021
]
OCA5_c07210
Transcription machinery [BR:
ocg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCA5_c07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF134
HTH_23
GerE
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AEI05444
UniProt:
B6JJB6
LinkDB
All DBs
Position
complement(764598..765146)
Genome browser
AA seq
182 aa
AA seq
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MPLTNALRDEILAAVPSLRAFAISLSGKSDRADDLVQETLLRALANIDSFQPGSNLPAWL
FTILRNLFRSDYRKRRREVEDAEGSYSKTLKSQPTQSSHLEFEEFRAALEKLPQDQREAL
ILVGASGFSYEDAAAICGCAVGTIKSRVNRARSKLSAMLYVDGTEDFGPDSTVRAVIGGS
GN
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcacaaacgccctacgcgatgaaattctggctgctgtgccgagtctccgcgcc
ttcgctatttcgctgagcggaaagagcgaccgcgccgacgacctcgtgcaggagacgctg
ctgcgcgctctcgccaacatcgattcattccagcccggctcgaatttgccggcctggctg
ttcacgatcctgcgcaacctgtttcgctccgactatcgcaaacggcggcgcgaggtggag
gatgccgagggcagctactccaagacgctgaagtcgcagccgacgcagagttcgcacctt
gagttcgaggaattccgcgccgcgctggaaaagctgccgcaggaccagcgcgaggctctg
atcctcgtcggcgcctccggcttctcctacgaggatgcggcggcgatctgcggatgcgca
gtcggcaccatcaagagccgcgtcaaccgcgcgcgctcgaagctcagcgccatgctctat
gtcgacggcaccgaagacttcggccccgacagcacggtgcgagccgttatcggtggcagc
ggcaactga
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