Afipia carboxidovorans OM5 (Goettingen): OCA5_c07520
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Entry
OCA5_c07520 CDS
T01617
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase, molybdoprotein XdhB
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00230
Purine metabolism
ocg01100
Metabolic pathways
ocg01120
Microbial metabolism in diverse environments
ocg01232
Nucleotide metabolism
Module
ocg_M00958
Adenine ribonucleotide degradation, AMP => Urate
ocg_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
OCA5_c07520 (xdhB)
Enzymes [BR:
ocg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
OCA5_c07520 (xdhB)
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Gene cluster
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Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AEI05475
UniProt:
B6JJ76
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Position
complement(797643..799982)
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AA seq
779 aa
AA seq
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MDKTAAEVLPSQAFGAVHTSVAHESAARHVSGTAVYIDDMPEPAGLLHAYLALSNISHGM
IRALDLSAVRAAPGVVGVLTASDIPGLNDMSAMNRKDEPILAKDKIEFDGQALFAVIAQT
REQARRACSLAKIDYDELPAAIDFADIDTRNGKLVTEPLVLTRGDTEAEIASAPHSLSGE
IRIGGQEHFYLEGQIAMAMPNDGDEIMVYSSTQYPAEVQRTVAHALNVPFHAVEIHTRRM
GGAFGGKETQATQFAAIAALAAQKFNKPIKIRPDRDDDMRLTGKRHDFNVSYRVGFDDDG
RIRGVDYHYALRCGYSADLSGAVADRALLHCDNTYYYPAVHAVSAPLYTNTASNTAFRGF
GGPQGVLGCERVMEEIAFALGKDPLEVRKANFYGTRDCNITPYRQEVEDNIIGRLVRELE
KTSEYARRRREIRAFNAQNRFIKRGLALVPVKFGMSFTNTNSNQAGALLHVYTDGSVQIN
HGGTEMGQGLYIKVAQVVAQELNIDISQIKATATTTGKVPNASATAGSTGSDLNGMAARD
AAIKIRKRLAAFAAKTYGGTPDDVAFLPGCVQVGSTRITFADLVKQAQFARVQLSATGFY
KTPKISWDRTKAFGKPYYYFAYGASCSEVSIDTLTGEYIVERVDILHDAGKSLNMAIDIG
QIEGGFIQGMGWLTTEELIWGRNGFLRTHAPSTYKIPLASDRPKIFNVALTGWSRNHEAI
SYRSKGVGEPPLLHGISVLHALSDAVASVANHCICPRLDAPATPERVLMAIERLRAQSG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaccgcggctgaagttctgccctcccaggctttcggcgccgttcacaccagc
gtcgcgcatgaatccgccgcacgccacgtcagcggcaccgccgtctacatcgacgacatg
cccgagccagccgggctgctgcacgcctatctcgcgctctcgaacatctcccacggaatg
atccgcgcgctcgacctctcggctgtgcgtgccgcgccgggcgtggtcggcgtgctcacg
gcgagcgacattccgggcctcaacgacatgagcgcgatgaaccggaaggacgagcctatc
cttgccaaagacaagatcgagttcgacggtcaggcccttttcgccgtgatcgcgcagacc
cgcgagcaggcacggcgcgcctgctcgctcgcgaagatcgactacgacgagctacccgcc
gcgatcgacttcgccgatatcgacaccagaaatggcaagctcgtcaccgagccgctggtg
ctcacgcgcggcgataccgaggcagaaatcgcatccgcgccgcacagcctgtcaggcgaa
attcgcatcggcgggcaggagcatttctacctcgaagggcaaatcgcaatggcgatgccc
aacgacggtgacgagatcatggtctattcgtcgacgcagtatcccgccgaggtgcagcgg
accgtcgcgcacgctctcaacgtgccgttccatgccgtcgagattcatacccgccggatg
ggcggcgcgttcggcggcaaggaaacccaggcgacacagttcgcggcgattgccgcgctc
gccgcacagaagttcaacaagccgatcaagatccgcccggatcgcgacgacgatatgcgc
ctcaccggcaagcggcacgacttcaacgtcagctatcgtgtcggcttcgatgacgacggc
cgcattcgcggcgtggactatcactatgcgctgcgctgcggctattccgcggacctgtcc
ggtgccgtcgccgaccgcgcgctgctccactgcgacaacacctattactatcccgcggtg
catgcggtgtccgcgccgctctacaccaacacggcgtccaacaccgcattccgtggcttc
ggcgggccgcagggcgtgctcggctgcgagcgcgtaatggaagagatcgcattcgcgctc
ggcaaggacccgcttgaagtccgcaaggcgaatttctacggcacgcgcgattgcaacatc
acgccgtaccggcaagaggtcgaagacaacatcatcggccgtctggtgcgcgagctggaa
aagacctcggagtacgcgcgtcgccgccgtgagattcgtgcgttcaatgcgcagaatcgt
ttcatcaaacgcgggctcgcgctggtgccggtgaagttcggaatgtcgttcaccaacacc
aattccaatcaggccggcgcgctgctgcacgtctataccgacggctccgtgcagatcaat
cacggcggcaccgagatgggccagggcctttacatcaaggtcgcacaggtcgtcgcgcag
gaattgaacatcgacatttcgcagatcaaggcgactgcgaccactaccggcaaggtgccg
aacgcatcggccaccgcgggctcgaccggctcggacctgaacggcatggcggcgcgcgat
gccgcgatcaagatccgcaagcgcctcgccgccttcgccgccaagacctatggcggcaca
ccggacgacgtcgccttcctgccgggctgcgtgcaggtcggcagcacgcgcatcaccttt
gccgatctggtgaagcaggcgcagttcgcccgcgtgcagttgtccgccaccggtttctac
aagacgccgaagatcagttgggatcgcaccaaggcattcggcaagccgtattattacttc
gcctacggcgcgtcgtgttcggaggtcagcatcgacactctgaccggcgaatatatcgtc
gagcgcgtcgatatcctgcacgatgcgggaaagtcgctgaacatggcgatcgatatcggc
cagatcgaaggcggcttcattcagggcatgggttggctcaccaccgaggagctgatctgg
ggccgcaacggattcctgcgcacccatgcgccctcgacctacaagattccgctggcctcc
gaccggccgaagattttcaacgtcgcgctcaccggctggtcgcgcaatcatgaggcgatc
tcctatcgctcgaaaggcgtcggcgagccgccgctgctgcacggcatctccgtgctgcac
gcgttgtcggacgcggttgcaagcgtcgcgaaccactgcatctgcccgcggctcgatgcg
ccggcgacgccggagcgggtgctgatggcgatcgagcggctgcgcgcccaaagcggctga
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