Afipia carboxidovorans OM5 (Goettingen): OCA5_c08430
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Entry
OCA5_c08430 CDS
T01617
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCA5_c08430 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocg03019
]
OCA5_c08430 (groEL)
03110 Chaperones and folding catalysts [BR:
ocg03110
]
OCA5_c08430 (groEL)
03029 Mitochondrial biogenesis [BR:
ocg03029
]
OCA5_c08430 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocg04147
]
OCA5_c08430 (groEL)
Enzymes [BR:
ocg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OCA5_c08430 (groEL)
Messenger RNA biogenesis [BR:
ocg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OCA5_c08430 (groEL)
Chaperones and folding catalysts [BR:
ocg03110
]
Heat shock proteins
HSP60 / Chaperonin
OCA5_c08430 (groEL)
Mitochondrial biogenesis [BR:
ocg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OCA5_c08430 (groEL)
Exosome [BR:
ocg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCA5_c08430 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
OCA5_c08430 (groEL)
Exosomal proteins of breast cancer cells
OCA5_c08430 (groEL)
Exosomal proteins of colorectal cancer cells
OCA5_c08430 (groEL)
Exosomal proteins of bladder cancer cells
OCA5_c08430 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
AEI05565
UniProt:
B6JIX0
LinkDB
All DBs
Position
complement(895700..897349)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDVKFSGDARERMLRGVDTLANAVKVTLGPKGRNVVINKSFGAPRITKDGVTVAKEIE
LEDKFENMGAQMVREVASKTNDTAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGID
IAVTAVIKDIEKRAKPVAASSEVAQVGTISANGDSTIGKMIAQAMQKVGNEGVITVEEAK
SLDTDVDIVEGMKFDRGYLSPYFVTNAEKMTAELEDAYILLHEKKLSGLQAMLPVLEAVV
QSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTGGQVI
SDDLGMKLENVTLKQLGRAKKAVIDKENTTIVNGAGKKADIEARVNQIKAQIEETTSDYD
REKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGTALLR
AKKAVGRINNDNSDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILDNKTETFGFDA
QNEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPKDAAPAMPAGGGMGG
MGGMGGMGF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagacgtaaaattctctggcgacgcgcgcgaacggatgctgcgcggcgtcgac
accctcgccaacgcggtgaaggtcacgctcggccccaagggccgcaacgtcgtcatcaac
aagagcttcggcgctccccgcatcaccaaggacggcgtcaccgtcgccaaggagatcgag
ctcgaggacaagttcgagaacatgggcgcgcagatggtgcgcgaagtcgcttccaagacc
aacgacaccgcgggtgacggcaccaccaccgcgaccgtgctcgcccaggcgatcgttcgc
gaaggcgccaaggcggttgccgccggcatgaacccgatggacctcaagcgcggcatcgac
atcgccgtcaccgccgtcatcaaggacatcgagaagcgtgcgaagccggttgcggcatcc
tcggaagtcgcccaggtcggcaccatttccgcgaacggcgacagcaccatcggcaagatg
atcgcgcaggcgatgcagaaagtcggcaacgagggcgtcatcaccgtcgaggaagcgaag
tcgctcgacaccgacgtcgatatcgtcgagggcatgaagttcgaccgcggctatctctcg
ccgtacttcgtcaccaacgccgagaagatgacggccgagctcgaggacgcctacatcctc
ttgcacgagaagaagctctccggtctgcaggccatgctgccggtgctggaagccgtcgtg
cagtccggcaagccgctcctcatcatcgccgaggacatcgagggcgaagcgctcgcgacc
ctcgtcgtcaaccgcctgcgtggcggcctcaaggttgccgccgtcaaggcgccgggcttc
ggcgatcgtcgcaaggcgatgctggaagacatcgcggtgctgaccggcggccaggtgatc
tccgacgatctcggcatgaagctcgagaacgtcacgctgaagcagctcggccgcgccaag
aaggcggtgatcgacaaggagaacaccaccatcgtcaacggcgccggcaagaaggccgac
atcgaggcgcgcgtcaaccagatcaaggcgcagatcgaggaaaccacctcggactacgac
cgtgagaagctgcaggagcgccttgccaagctcgccggcggcgtcgcggtgatccgcgtc
ggcggtgcgaccgagatcgaggtcaaggagaagaaggatcgcgtggaggacgcgctcaac
gccacccgcgccgcggtgcaggaaggcatcgttccgggcggcggcaccgctctccttcgc
gccaagaaggcagtcggccgcatcaacaacgacaactccgacgtgcaggccggcatcaac
atcgtgctgaaggcgctggaagctccgatccgccagatcgccgagaacgccggtgtcgag
ggctcgatcgttgtcggcaagatcctcgacaacaagaccgagaccttcggcttcgacgcc
cagaacgaagagtatgtcgacatggtcgccaagggcatcatcgacccggccaaggtggtt
cgcactgcgctgcaggacgcggcctccgtcgcgggcctcctcgtcaccaccgaggcgatg
gttgccgagctgccgaaggacgccgcaccggcgatgcccgccggcggtggaatgggcggc
atgggtggaatgggcggcatgggcttctga
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