Afipia carboxidovorans OM5 (Goettingen): OCA5_c08710
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Entry
OCA5_c08710 CDS
T01617
Name
(GenBank) pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocg03009
]
OCA5_c08710
Enzymes [BR:
ocg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
OCA5_c08710
Ribosome biogenesis [BR:
ocg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OCA5_c08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AEI05593
UniProt:
B6JIV3
LinkDB
All DBs
Position
925356..927437
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AA seq
693 aa
AA seq
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MPRDNDKNNTGGRPPGRGRPSGGGRSGGAGKGRPGGERPARSSAPRGERKFGDKKFGDKK
FGDRKPAGRKFGDGDRPRPRFDRDERPARTERSEGRPFKPREDHGERPARGPRKEFGPRK
EFGAGPRGEGRSFKPREDRAPRGERSDARPSRSGGFGDKKFGDKKFGEKRPYTPRGEGFR
KDGPRSDGPRPARFNRDDRPQRDDRPRFDRDEKRPARGPRKEFGDRPDRGNDKPWETRAP
RRDDTKRFERPRDDNRSASDRPRFSRSRDDRPEGGERFERKREGFGRPRFERDRDERAPR
RNAWQEHPRGEKRERFERDERPRRDNEDDSKIFAKRPAFGGRGGYRERPASTDKRAAPKK
ADKSGERIAKVVARAGLCSRRDAEDWIMQGRVAVNGRVIGSPALDVTARDVITVDGQPLP
ERERTRLFLYHKPRGLMTTHDDPEGRPTVFDHLPDGLPRLISIGRLDFNTEGLLLLTNDG
GLSRALEHPDTGWLRRYRVRAHGDVTQARLDELKNGVEVDGVKYGSIDATLERDQGANVW
LTFAIREGKNREVRNVMAHLGLEVNRLIRVSYGPFQLGEIPEGQVEEIKSRVLREQLGDK
IIALAGAQFDKPVQEGDDAEAKLGRDGTPLRSKAANKKIKRSAIEDRKGRRVVVQRSGSD
EARARNEAEAGGYGPPRRPQRRYHGKRDFTPKD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgacaacgataaaaacaacacaggcggacgtccgcccggccgtggccgcccg
tccggcggtggccgcagcggcggtgccggcaagggccgccccggtggcgagcgccccgcg
cgatcctctgccccgcgcggcgagcgcaaattcggtgacaaaaagttcggcgacaagaag
ttcggcgaccggaagcctgccgggcgcaaattcggcgacggcgatcgtccgcgtccgcgt
tttgatcgcgacgagcggcccgcgcgcaccgagcgtagcgagggacgcccgttcaagccg
cgcgaggaccatggcgagcgaccggcgcgtgggccacgtaaggagtttggcccccgcaag
gagtttggtgcaggtccgcgtggtgaaggacgttccttcaagccgcgcgaagatcgtgcg
ccgcgtggcgagcgcagcgatgcgcgcccgagccgttccggtgggtttggcgacaagaag
ttcggtgacaagaagtttggcgagaagcggccttatacgccgcgcggcgaaggcttccgc
aaggatggcccgcgtagcgatggaccgcgtccggcgcgtttcaatcgcgacgatcgtccg
cagcgcgatgatcgtccgcgtttcgatcgcgatgagaagcggcccgcgcgcggcccgcgc
aaggaatttggcgatcggccggatcgcggcaatgacaagccgtgggagacgcgcgcgccg
cgccgtgatgataccaagcgtttcgagcgtccacgcgacgataatcgcagcgcgagcgat
cgtccgcggttttcgcgatcccgtgacgatcgccctgaaggtggtgagcggttcgagcgc
aagcgtgaaggctttggccgcccgcgctttgagcgcgatcgcgatgaacgcgctccgcgc
cgcaacgcctggcaggagcatccgcgcggcgagaagcgtgagcgcttcgagcgcgacgag
cggcctcgccgcgacaacgaggacgacagcaagattttcgccaagcgcccggccttcggt
ggccgcggcggttatcgcgaacggccggccagcaccgacaagcgcgcggcgccgaagaag
gccgacaagagcggcgagcgcatcgccaaggtggtggcgcgcgccgggctgtgctcgcgg
cgtgatgcggaagactggatcatgcaggggcgcgttgccgtcaatggccgcgttatcggc
tcgcccgcgctcgatgtgacggcgcgcgatgtgattacggtcgacggccagccgctgccg
gagcgcgaacgcacgcggctgttcctctatcacaagccgcgcgggctgatgacgacgcat
gacgaccctgaaggacggccgacggtgttcgatcatctgcctgacggactgccgcgcctg
atttccatcggccggctcgacttcaacaccgaagggttgttgctgctcaccaatgacggc
gggctgtcgcgcgcgctcgagcatcccgacaccggctggctgcggcgctatcgcgtgcgc
gcccatggggatgtgacgcaggcgcggctcgacgaactgaagaacggcgtcgaagtcgat
ggcgtcaaatacgggtcgatcgatgcgacgctggagcgcgatcagggcgccaacgtctgg
ctgacgttcgcgatccgcgaaggcaagaaccgcgaggtgcgtaacgtgatggcgcatctc
gggctcgaggtgaaccgcctgatccgcgtgtcgtacggcccgttccagctcggcgaaatt
cccgaagggcaggtcgaggagatcaagagccgcgtgctgcgcgagcagctcggcgacaag
atcatcgcgctcgccggtgcgcaattcgacaagccggtgcaggagggcgacgacgcagag
gccaagctcggtcgtgacggcacgccgttgcgcagcaaggcggcgaacaagaagatcaag
cggtccgcgattgaggatcgcaagggccgccgcgtcgtggtgcaacgctccggcagcgac
gaagcgcgtgcgcgcaacgaggccgaggcgggtggctatggcccaccgcgccgcccccag
cgtcgctatcacggcaagcgcgacttcacgccgaaggattga
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