Afipia carboxidovorans OM5 (Goettingen): OCA5_c11050
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Entry
OCA5_c11050 CDS
T01617
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocg03036
]
OCA5_c11050 (smc)
Chromosome and associated proteins [BR:
ocg03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
OCA5_c11050 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA
SMC_hinge
AAA_29
ABC_tran
DUF6776
Motif
Other DBs
NCBI-ProteinID:
AEI05824
UniProt:
B6JF20
LinkDB
All DBs
Position
complement(1179544..1183008)
Genome browser
AA seq
1154 aa
AA seq
DB search
MKLTRLRLHGFKSFVEATDFLIEPGLTGVVGPNGCGKSNLVEALRWVMGETSYKSLRAAD
MDSVIFSGSGNRPARNHAEVVMSIDNADRTAPSSMNDSELLEVSRRIEREAGSVYRINGR
DVRARDVQILFADAATGARSPALVHQGKIGEIIQARPDQRRRVLEDAAGVAGLHARRHEA
ELRLKAAETNLTRVEDVIGQLASQIEGLKRQARQAIRFREVAAKVRKAEALLFHLRWLQA
NEDVAESSRTHNATVREQAERVREQAESARIQAIRASELPALRENEARAAAGLQRLTNAR
DMLAREEERAKERAAELDRRLTQLAADVAREQQQLSDAGVAVERLDSEETILKEEIKSRV
EKRSGADARVSEADAALAAAERTFSELTTALADLTARRRQFEANVRTHTERLARIDQEIA
NVGRDVEKLDAETGSLANLETLAQAMTAAQDTLAQSATTVQTNEAAHIAARAKLDGSRAP
VVEADKRVQRLETEAKTIAKLVNSETKNLWPSIIDGVSVAKGYEKALGAALGDDLDAPTD
ASAPLRWSNLGIMADDPALPDGVEVLATHVNAPPELARRLAQIGVVSRERGAELVSRLKT
GQRLVSTEGDLWRWDGFIAGAHAPTGAARRLAERARLADIEHELEQARADAATKRQALEA
AESELKFAAAAEHTARESARAAQRDADTARERHASAEREINRHTARRSALAEAHTRLAAD
RSEVESAHTVAVQAVADLPASDETEAQLATARAAMDEKRQSAAQVRAEAQALAREAELAD
RRVQAIASERNEWQARRDNATKQIATIEERTTEVKTERAQLEDAPAQFAEKRRGLISEIE
TAEAARREAADALAAAEALMAETDRAARASLEALSAAREATARAEERMEASRRRLEDIER
EIRDGLETEPQNAASLAEVTPETELPDVASAEANVEKLRRDRERLGAVNLRAEEELREIE
TQHTSLTTERDDLVEAIKKLRTGIQSLNKEARERLLSSFETVNNHFKRLFTQLFGGGQAE
LQLIESDDPLEAGLEIIAKPPGKKPQSLSLLSGGEQALTALALIFAVFLTNPSPICVLDE
VDAPLDDHNVERFCNLLHEMTSQTETRFIIITHNPITMARMNRLFGVTMAERGVSQLISV
DLDGAMKVLDQNVA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaacgcgtctacgcctgcatggattcaagtcgttcgtcgaggcgaccgacttc
ctgatcgaacccggcctcaccggcgtggtcggccccaatggctgcggcaagtcgaacctt
gtcgaggcgctgcgctgggtgatgggcgagacgtcctacaagtcgctacgcgccgccgat
atggattccgtgatcttctccggctccggcaaccgccctgcgcgcaaccacgccgaagtg
gtgatgtcgatcgacaatgcggaccgcacagcgccgtcgtcgatgaacgattccgagttg
ctggaagtctcgcgccggatcgagcgcgaagcaggctcggtctatcgcatcaacggccgc
gacgtgcgtgcacgcgacgtgcagattctcttcgctgacgccgcgaccggtgcacgctcc
cctgccctcgtccaccagggcaagatcggcgagatcattcaggcccgccccgaccagcgc
cgccgtgtgctggaagatgccgcgggcgtcgccggccttcatgcccgccgccacgaggcc
gagctgcggctcaaggctgccgaaaccaacctcactcgcgtcgaggacgtgatcggccag
cttgcgagccagatcgaaggcttgaagcggcaggcacggcaggcgatccgcttccgcgaa
gtcgctgcaaaggtccgcaaggccgaggcgttgctgtttcacctgcgctggctgcaagcg
aacgaggatgttgctgaatcgagccgcacccacaatgcgacggtgcgcgagcaggccgag
cgcgttcgcgagcaggccgagagcgcacgcattcaggcaatccgcgcttccgaactacca
gcattgcgcgagaacgaagcgcgtgcagccgctggcctgcagcgcctcaccaatgcgcgc
gacatgcttgcgcgggaggaagagcgtgccaaggaacgcgccgccgaactcgatcgccgc
ctgacacaattggccgccgacgtcgcgcgcgaacagcagcaattgtccgacgccggcgtc
gccgtcgagcgcctcgactccgaagagacgatcctcaaggaagagatcaagtcgcgcgtt
gaaaagcgcagcggtgccgatgcccgcgtctcggaagcggacgcggcgcttgccgctgcc
gagcgcaccttctccgaactcaccactgcgctcgccgacctcaccgcacgtcgccgccag
ttcgaggcaaacgttcgcacccacaccgaacggctcgcgcgcatcgatcaggagatcgcg
aatgtcggccgcgacgtcgagaagctcgacgccgaaaccggcagcctcgccaatctcgag
acgctggcgcaggcgatgaccgcggcgcaggacacgctcgcgcaatccgccaccaccgtg
cagacgaacgaagccgcgcatatcgccgcgcgcgccaagctcgacggctcgcgtgcgccc
gttgttgaagccgacaagcgtgtgcagcggctcgagaccgaagcgaagaccatcgccaag
ctcgtcaacagcgagaccaagaatctgtggccgtcgatcatcgatggcgtcagcgtcgcc
aagggttacgagaaggcgttgggcgctgcgctcggcgacgatctcgacgcgccgaccgat
gcgtccgcaccactgcgctggtcgaacctcggcatcatggccgacgaccctgcactgccg
gatggcgtcgaagtgctcgccacccatgtcaacgcgccgccagaactggcgcgacgtctc
gcgcagatcggcgtcgtcagccgcgaacgtggcgccgaactcgtcagccgcctcaagacc
ggccagcggctggtctcgaccgaaggcgatctgtggcgctgggacggcttcatcgccggc
gcccatgcaccgaccggcgcggcacgccgcttggccgagcgcgcacgcttggccgacatc
gagcacgaactggagcaggctcgcgcggatgccgccaccaagcggcaagcgctggaagcc
gctgagtccgagctaaagttcgccgccgccgccgagcataccgcacgcgaatccgcccgc
gccgcacagcgcgatgccgataccgcgcgcgagcgtcatgcgagcgccgagcgcgagatc
aaccgccacaccgcgcgccggtccgcacttgccgaggcgcacacccgcctcgccgccgac
cgcagcgaagtggagagcgcccacaccgttgccgttcaggcggtcgcagaccttccggca
agcgacgagaccgaagctcaactcgccaccgcacgcgcagcgatggacgagaagcgtcag
tcggccgcgcaggtgcgtgccgaggcgcaggcgcttgcccgcgaagcagagctcgccgac
cgccgcgtgcaggcgatcgcctccgagcgcaacgagtggcaggcccgccgggacaatgcc
accaaacagatcgcgaccatcgaggagcgcaccaccgaggtgaagaccgagcgtgcgcag
cttgaggacgcgccggcgcaattcgccgagaagcgccgcggcctcatcagcgagatcgag
actgccgaagccgcgcgccgcgaagctgccgacgcgctcgctgcagccgaggcgctgatg
gccgagaccgaccgcgcggcacgcgcctcgcttgaagctctctctgccgcgcgcgaagca
accgcccgtgccgaagagcgcatggaagcaagccgccgccgtctcgaagatatcgagcgc
gaaatccgcgacggccttgagaccgagccgcagaacgccgcatcgcttgcggaagtcacg
cccgagaccgagttgcccgacgtcgcctccgccgaggccaatgtcgagaagctgcgccgc
gaccgcgagcgccttggcgctgtgaacctgcgcgccgaggaagagctgcgcgagatcgag
acccagcacaccagcctcaccaccgaacgcgacgaccttgtcgaagcgatcaagaagctg
cgcaccggcatccagagtctcaacaaggaagcgcgcgaacgcctgctgagttcgttcgaa
accgtgaacaaccacttcaagcggctgttcacacaactgttcggcggcggtcaggccgag
ttgcagttgatcgagagcgacgatccgctcgaggcaggcctcgagatcatcgccaagccg
cccggcaagaagccgcagtcgctgtcgctgctctccggcggcgagcaggcgctgaccgcg
ctcgcgctgatcttcgcggtgttcctcacgaacccctcgccgatctgcgtgctggacgaa
gtcgacgcaccgctcgacgaccacaacgtggagcggttctgcaacctgctgcacgaaatg
acgtcgcagaccgagacgcgcttcatcatcatcacacacaacccgatcacgatggcgcgg
atgaaccggctgttcggtgtcaccatggccgagcgcggcgtctcgcagctcatctcggtg
gacctcgatggtgcgatgaaggtgctggaccagaacgtggcgtga
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