Afipia carboxidovorans OM5 (Goettingen): OCA5_c11360
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Entry
OCA5_c11360 CDS
T01617
Symbol
glyS
Name
(GenBank) glycine-tRNA ligase beta subunit GlyS
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCA5_c11360 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocg01007
]
OCA5_c11360 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocg03016
]
OCA5_c11360 (glyS)
Enzymes [BR:
ocg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
OCA5_c11360 (glyS)
Amino acid related enzymes [BR:
ocg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OCA5_c11360 (glyS)
Transfer RNA biogenesis [BR:
ocg03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OCA5_c11360 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AEI05855
UniProt:
B6JEV3
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All DBs
Position
1212975..1215392
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AA seq
805 aa
AA seq
DB search
MPDLLFELFSEEIPARMQAKAADDLRKMVTDKLVAEGLVYDGAKAFATPRRLALTVHGLP
GRQPDLKEERKGPKVGAPDAAIQGFLKATGLASLDEAKIQKDPKKGDFYIALIEKTGRPA
IDVIAEILPVVVRTFPWPKQMRWGERSAKSGALTWVRPLHSIVATFGLETEDPDVVTFDV
GGIKAGQVTRGHRFMAPAEFSVRRFEDYVAKLDAAKVMLDPQRRRDTILADAKQLAFAQG
YELVEDDALLEEAAGLVEWPVALMGSFDPAFLAIPDEVIRATIRNNQKCFVVRDPKSGAA
SRTALGDAAPTGKLAPKFILIANIEASDGGSAIIAGNERVIRARLSDAKFFYETDLKTRL
EERLNKFDNIVFHEKLGSQAERIARIERLAAELAPLVGADVEKAKRAARLAKADLLTEVV
GEFPEVQGLMGKYYALAQGEDASVAQAIEDHYKPQGPSDRVPSDPVAIAVALADKIDILT
GFWAIDEKPTGSKDPFALRRAALGVIRLISDNSLRLKIIERLRSAHELFLRKEANAFRLF
TRNPTSGFFEKLSFWQDESEWCHTEEDGSVSFYEEKWPLPSDQEIWCYRGERDLSDESVA
NYFLLQKMTPSVFRKEVLDYSVCLGVLDKLPSDVLSFFADRLKVQLREQGARHDLVDAVF
ALEGQDDLLMVVRRVEALGKFLDTDDGKNLLAGTKRAANILAIEEKKDKRSFTGAPDAAL
YKLDEEKALARAIDEVKAEAAAAVAREDFAGAMSVLAKLRPAVDAFFDKVKVNDDDKAVR
ENRLKLLNEIREATRAVADFSRIQD
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcttctgtttgaactgttctccgaagaaattcccgcccgcatgcaggcgaag
gcggcggatgatctgcgcaagatggtgaccgacaagcttgtcgccgaggggcttgtctat
gatggcgccaaggcatttgcgacgccgcgccgtctcgcgctcaccgtgcatggcttgccc
ggccgtcagcccgatctgaaggaagagcgcaagggtcccaaggtcggcgcgccggacgcg
gcgatccagggctttctgaaagcaaccggtcttgcctcgctcgatgaagcaaagattcag
aaagacccgaagaagggcgatttctatatcgcgctgatcgagaagacgggccgtcccgcg
atcgatgtgatcgcggagatcttgccggttgtcgtgcgcaccttcccgtggccgaagcag
atgcgctggggcgagcgttcggcaaaatccggcgcgctcacatgggtgcggccgctgcat
tccatcgtcgcgaccttcggcctcgagaccgaagaccccgacgttgtgacgttcgatgtc
ggtggcatcaaagcggggcaggtgacacgcggtcatcgcttcatggcgccggccgaattt
tccgtgcgccgcttcgaggattatgtcgcgaagctcgatgccgccaaggtgatgctcgat
ccgcagcgccggcgcgatacgatccttgcggatgcgaagcagcttgcattcgcgcaaggc
tatgagcttgtcgaagacgacgcgttgcttgaagaagcggcgggtcttgtcgaatggccg
gtcgcgctgatgggctcgttcgatccggcgtttctcgcgatccccgatgaggtgatccgc
gccaccatccgcaacaatcagaagtgctttgtggtgcgcgatcccaagtctggcgcagcg
tcgcggactgcgctcggcgacgcggcgccgaccggaaagctcgcgccgaagttcattctc
atcgccaacatcgaggcgagtgacggcggcagtgcgatcatcgccggcaatgagcgcgtg
atccgcgcacggctgtcggacgccaaattcttctatgagaccgacctcaaaacccggctt
gaggagcggctcaacaaatttgacaatattgtgttccacgaaaaactcggctcgcaggcc
gagcgtatcgcgcgcatcgagcggctggcggctgagctcgcgccgctggtcggcgccgac
gtggaaaaggcgaagcgcgccgcgcgtcttgccaaggcggacctgctcaccgaagtcgtc
ggcgaatttcccgaggtgcaaggcctgatgggcaagtactacgcgctggcccagggcgag
gacgcgagcgtcgcgcaggcgattgaggatcactacaagccgcagggcccgagcgaccgc
gtgccgagcgatcccgttgcgattgctgttgcgctcgcggacaagatcgacattctcacc
gggttctgggcgatcgatgaaaagccgaccggatcgaaggacccattcgcgttgcgccgc
gctgcgctgggtgtgatccggttaataagcgataattctttacgcttaaaaattattgag
cgacttcgttctgctcatgaactgtttctacgaaaagaagcaaatgcctttcgtttgttt
acgcgcaatccaacgtcagggttctttgagaaactttcattttggcaagacgaatcggaa
tggtgtcataccgaagaagacgggtcagtctcgttctatgaagaaaaatggcctttgcct
tcagatcaagaaatctggtgttatcgtggggaaagggacctttccgatgagtctgtagcg
aattactttcttctgcagaaaatgacgccctcggtttttcggaaggaagtcttggattac
tctgtgtgtttaggagtgctcgataaactgccttccgacgttctctccttcttcgccgat
cgcctgaaagtccagctccgcgagcagggtgcgcggcatgacctcgttgatgcggtgttc
gctcttgaagggcaggacgatctcttgatggtcgtgcgccgggtcgaggcgctcggaaaa
ttcctcgataccgacgacggcaagaatttgctcgcgggcaccaagcgcgcggcgaacatc
ctcgccatcgaggagaagaaggacaagcgcagcttcaccggtgcgccggatgccgcgctc
tacaagctcgatgaagagaaggctctcgcgcgcgccatcgatgaggtgaaggctgaggca
gccgcggcggttgctagggaagattttgcaggcgcgatgagcgtgctggcgaagctgcgg
cccgcggtcgatgcgttcttcgacaaggtcaaggtcaacgacgacgacaaggcggtgcgc
gaaaaccgcctcaagctcctgaacgaaatccgcgaggcgacgcgcgcggtcgcggatttc
tccaggattcaggactga
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