Afipia carboxidovorans OM5 (Goettingen): OCA5_c13010
Help
Entry
OCA5_c13010 CDS
T01617
Symbol
potA1
Name
(GenBank) spermidine/putrescine import ATP-binding protein PotA
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA5_c13010 (potA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocg02000
]
OCA5_c13010 (potA1)
Transporters [BR:
ocg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OCA5_c13010 (potA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA
SMC_N
AAA_16
Mg_chelatase
RsgA_GTPase
AAA_29
AAA_22
Rad17
AAA_28
AAA_23
TOBE_3
AAA_30
AAA_5
SRP54
NACHT
AAA_24
NB-ARC
OB_MalK
AAA_14
AAA_19
ATPase_2
DO-GTPase2
AAA_25
PRK
nSTAND_NTPase5
ATP-synt_ab
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEI06017
UniProt:
B6JH02
LinkDB
All DBs
Position
1389743..1390849
Genome browser
AA seq
368 aa
AA seq
DB search
MDAHLDVRRLRKAYGDFVALDDVSFTAASGEIVALLGPSGCGKTTLLNVIAGFLSPDKGT
VIVDGRDIVRVPPHKRDMAMVFQNYALFPHMSVEHNVAFGLKMRSISSGEVGQRVQEALE
LVQLGGLGKRYPKELSGGQQQRVALARALVVRPSVLLLDEPLSNLDALLRKRMREEMRQI
LKSANITTVVVTHDQEEALVSADRIVLLASGRVEQSSTPNELYERPQTIFSARFMDVTNF
LDGTVIAHERGNAVVETAFGRLRAEVEGCTVGDRVTVAIRPENITKGEDAGENCVTGEVI
SSTYHGPVRRIEIEANGARLIADIPVKRCLSKIGDRLSVSWPADDTRILPNEEPGASMEA
SAAERVLQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccacctcgacgtccgtcgactgaggaaggcgtatggagacttcgtcgcgctt
gacgatgtctccttcacggccgcttccggagagatcgtggcgctgctcggtccctccggt
tgtggcaaaaccaccttgctcaacgtgatcgcgggctttctgtctcccgacaaaggcacc
gtcatcgtcgatggtcgcgacatcgtccgtgtgccgccgcacaagcgggacatggccatg
gtgttccagaactatgcgttgtttccgcatatgagcgtcgagcacaacgttgccttcggc
ctcaagatgcggagcatttcgtctggcgaggtggggcaacgcgtgcaggaggcgctcgaa
ctcgtacagcttggcggacttgggaaacgctatcccaaggagctttcgggcgggcagcag
caacgcgtggcgctcgcgcgcgcactcgtagtgcgtccgtccgttcttcttctggatgag
ccgctgtcgaatctcgatgccttgctgcgcaagagaatgcgcgaggagatgcggcagatt
ctgaaatcggccaatatcaccacggttgtggtgacgcacgatcaggaggaggcgctggtc
tcggctgaccggatcgtccttctcgcgtcgggacgcgtcgagcaaagctccacgccgaac
gaactctatgaacggccgcagaccatcttcagtgcacgcttcatggacgtcaccaatttc
ctcgatggcacggtgatcgctcatgagcgcggcaatgctgttgtcgagacggcattcggc
cggttgcgggcggaggtggagggttgcacggtcggcgacagggtcaccgttgccatccgg
cctgagaacatcaccaagggagaggatgccggcgaaaactgtgtgaccggggaagtcatc
tccagcacctatcatgggccggtgcggcggatcgagattgaggcgaatggcgcgcggctg
atcgcggatattccggtcaagcgttgcctgagcaagatcggggatcggttgtcggtctcg
tggccggccgacgacacccgcattctgccgaacgaagagccgggcgcatcgatggaagcg
agcgccgcggaaagagtcctgcaatga
DBGET
integrated database retrieval system
