Afipia carboxidovorans OM5 (Goettingen): OCA5_c21710
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Entry
OCA5_c21710 CDS
T01617
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCA5_c21710 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocg03400
]
OCA5_c21710 (recO)
DNA repair and recombination proteins [BR:
ocg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OCA5_c21710 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OCA5_c21710 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AEI06874
UniProt:
B6JGG5
LinkDB
All DBs
Position
complement(2358204..2358953)
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AA seq
249 aa
AA seq
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MEWTDDGIILGTRRHGEANAIVELLTRSHGRHLGLVRGGAGTRMRPLLQPGNSVGAVWRA
RLDEHLGYYALEGTRLRAATMLSYSHAAYGITHLAALARLLPERAPHDGIYEQFEAILED
FDDPVIAATHVVRFEMAMLEELGFGLDLSCCAATGTHTDLIYVSPKSGCAVSRSAGEPWR
ERLLPLPAFLRAGNEESSPDGEADIMEGFRLTGMFLLRNVLEPRGQAHSDARAGFIAAVA
RSRVTLAAE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggagtggacggacgacggcattattctcggcacgcggcggcatggcgaagcaaacgcc
atcgtcgagttgctgacgcgcagccacggccgtcacctcggtctcgtgcgcgggggggcg
ggcacgcggatgcggccgctgttgcagccgggcaattcggtcggcgcggtctggcgtgcg
cggctcgacgaacatctcggctattacgccttggaaggcacgcggctgcgcgcggcaacc
atgctcagctattcgcatgccgcttacggcatcacccatctggcggcgctggcgcggctg
ttgcccgagcgcgcgccccatgacggcatctacgagcagttcgaggcgatcctcgaggat
ttcgacgatcccgttattgccgcgacccatgtcgtacgcttcgagatggcgatgctggaa
gagttgggtttcggcctcgatctctcctgctgcgcggcgacgggcacgcacaccgatctc
atctacgtctcgccgaaatccggttgcgcggtgtcgcgctcggcgggcgagccctggcgc
gaacggctgctgccgctcccggcgtttctgcgcgccgggaatgaggagagcagccccgac
ggcgaggccgacatcatggaaggcttccgcctcactgggatgtttttgttgcgcaatgtg
ctggagccacgcggacaggcgcattccgacgcgcgggccggcttcatcgcggcggtggcg
cgctcgcgggtgacgctcgccgcggagtga
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