Afipia carboxidovorans OM5 (Goettingen): OCA5_c21870
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Entry
OCA5_c21870 CDS
T01617
Name
(GenBank) putative lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocg01011
]
OCA5_c21870
Enzymes [BR:
ocg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OCA5_c21870
Peptidoglycan biosynthesis and degradation proteins [BR:
ocg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OCA5_c21870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Phage_lysozyme2
TPR_16
TPR_2
Motif
Other DBs
NCBI-ProteinID:
AEI06890
UniProt:
F8BXQ3
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All DBs
Position
2371278..2373467
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AA seq
729 aa
AA seq
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MASLLFKTAALAGGALMIVTLAPAPVEAVPLPRPRPIPRNVIPQTAKSLSQLPAQPKLNG
APPPAPLAAKPPVQAAPPPRPLASKSRAPLAVAPTSTTSRADLQTLQQIIDLVRAKRQQD
ATQMQSSISDPLARKLSEWIILRSEDNGASSDRYLAFITENPSWPSQTFFRRRGEAALWD
DRRDDSTILAFFGNEQPLSAKGRFALARALLNRGDQARAARLVRTAWHEDFFTSAVEDAA
LSQFSALLSGGDYKRRMEELAYGSDTDGALRAAKHLGGGYVALTKARIGLNRRTGNPRAL
LNAVPANLRGDPLYVLSRIQYLRREDKITEAARLMLDAPRDPARLVNTNEWWIERRLLAR
KLIDIGEHRTAYRVARDAAIPERGIYKTEREFTAGWIALRFLKDPATAAQHFARIGINTT
NPTAQARAGYWQGRAAEAAGRSQEARTAYQAAAVHSTSYYGQLARAKLHLPQLSLAGKPA
TPRGASRLEVVRAVELLYALDEGNYIIPIMSDMGENADPDALAALCDLAERNNDPRGMLI
AGKAALNRGLPFDHYAYPVNGIPPYRNLGPQVEKAIVFAIARQESAFNPTVVSPANAYGL
MQVTPGAAKYVTKKYGGTYDLARLKGDPPYNAMLGAAELGGLIEDYRGSYIMTFAGYNAG
RGSVRKWVARYGDPRDASIDAVDWVELIPFSETRNYVQRVMENLQVYRARFGGSHQLLIE
ADLRRGAVQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggcatctcttctcttcaaaacggccgcgctcgcaggcggggccctgatgatcgtgacg
ctcgcgcccgctcctgtcgaagcggtgcccctgccgcggccgcgcccgatcccgcgcaac
gtgatcccgcagaccgcaaagtcgctgtcgcagcttcccgcccagccgaagctcaacggc
gcgccgccgcccgcccccctggccgcgaagccgccggtgcaggccgcaccgccgccgcgc
ccgctggcctcgaagtcgcgtgcgccgcttgcggtcgccccgacctcgaccacctcgcgc
gccgacctgcagacgctgcaacagatcatcgacctcgtccgcgccaagcgtcagcaggac
gcgacgcagatgcagagctcgatcagcgatccgctggcgcgcaagctgtcggaatggatc
atcctgcgcagcgaggacaatggcgcctcctccgaccgctacctcgccttcatcaccgag
aacccgagctggccgagccagaccttcttccgccgccgcggcgaggccgcgctgtgggac
gaccgccgtgacgacagcaccatcctcgccttcttcggcaacgagcagccgctttcggcg
aagggacgtttcgcgctcgcccgcgcgctgctcaaccgcggcgatcaggcacgcgccgcg
cggctcgttcgcacggcctggcatgaggatttcttcacctcggccgtggaggacgcagcc
ctctcgcaattttccgcactcctcagcggcggcgattacaagcggcggatggaagagctt
gcctacggcagcgacaccgacggcgcgttgcgcgcggcaaagcatctcggcggcggctat
gtcgcactcaccaaggcgcggatcggcctcaaccgcaggaccggcaacccgcgcgcgctg
ctcaacgccgtgccggccaacctgcgcggcgacccgctctacgtcctgagccggattcaa
tatctgcggcgcgaggacaagatcaccgaggccgcgcggctgatgctggacgcgccgcgc
gacccggcacgcctcgtcaacaccaacgaatggtggatcgagcggcggctgctggcgcgc
aagctgatcgacatcggcgagcaccgcaccgcctatcgcgtggcgcgcgacgcggcgatc
cccgaacgcggcatctacaagaccgagcgggagttcactgcgggctggattgctctgcgt
ttcctgaaggaccccgccaccgccgcccagcacttcgcccgcatcggcatcaacaccacc
aacccgaccgcgcaggcgcgcgcgggctactggcagggtcgcgcagcggaggccgccgga
cgttcgcaggaggcacgcaccgcctatcaggcggcggccgtgcattccaccagctattac
ggccagcttgcacgcgccaagctgcatttgccgcaattgagcctcgccggaaaacccgcg
accccgcgcggcgcgtcgcggctcgaggtggtgcgcgcggtcgagcttctctacgcgctg
gatgagggcaactacatcatcccgatcatgtcggacatgggcgagaacgccgatcccgac
gcgctcgctgcgctgtgcgacctcgccgagcgcaacaacgatccgcgcggcatgctgatc
gccggcaaggcggcactaaaccgcggcctgccgttcgaccactatgcctatccggtgaat
ggcatcccgccctatcgcaacctcggcccgcaggtggagaaggccatcgtcttcgccatc
gcgcggcaggaaagcgccttcaaccccaccgtcgtgtcgcccgccaacgcctacggcctg
atgcaggtgacgccgggcgcggccaaatacgtcaccaagaagtacggcggcacctatgat
ctcgcgcggctgaagggcgacccgccctacaacgcaatgctcggcgcggccgaactcggc
gggctgatcgaggattatcgcggctcctacatcatgacgttcgctggctacaacgcggga
cgcggcagcgtgcgcaaatgggtcgcgcgctacggcgacccgcgcgatgcaagcatcgat
gcggtggactgggtggagctgatcccgttctcggaaacccgcaactatgtgcagcgggtg
atggagaacctgcaggtctatcgcgcccgcttcggcggcagccaccaattgctgatcgaa
gccgacctgcgccgtggcgcggtgcagtaa
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