Afipia carboxidovorans OM5 (Goettingen): OCA5_c22730
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Entry
OCA5_c22730 CDS
T01617
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocg03400
]
OCA5_c22730 (phrB)
Enzymes [BR:
ocg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OCA5_c22730 (phrB)
DNA repair and recombination proteins [BR:
ocg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OCA5_c22730 (phrB)
Prokaryotic type
OCA5_c22730 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
AEI06974
UniProt:
B6JF48
LinkDB
All DBs
Position
2458245..2459708
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AA seq
487 aa
AA seq
DB search
MLLLMASASSVIVWFRNDLRLSDHAALAAAAGTGAPLICLFILDEAAAQSARRPLGAAAK
WWLANSLRTLDRELRKRGQRLILRRGDTATILVQIAQEAKAKAVFWLDSEIPAEAACARQ
VITALHEIGVETHISRSDLLASPSMIRNKEGHGLRVFTPFWKRVRALGDPPPPLPAMKKL
PPSVASVESESIEDWQLEPLHPDWAGGLRARWKPGEAGARKKLDAFLDDAIDGYASGRDD
LARDQTSHLSAHLRFGEISPRQVFHATRFAAAHNPALSHDVEKFLSELGWREFCRHLLFD
QPDLHRQDLQPSFDNFPWRTDRAALSAWQQGRTGYPIVDAGMRELWHTGTMHNRVRMVAA
SFLVKHLLIDWREGERWFWDTLVDADPGSNPGNWQWVAGCGADAAPYFRIFNPVLQGEKF
DPDGAYVMKWVPELAKLPPKLIHQPWEATPMELAAAGITLGKTYPAPIVDHKAARERALA
AYRKMRP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcctgatggcctctgcttcttctgtcatcgtctggtttcgtaacgacctgcga
ctctccgatcatgccgcacttgcggcagccgctggcaccggcgcgcctttgatctgtctc
ttcatccttgatgaggcagccgcgcaatcggctcggcgcccgcttggcgcagccgcaaaa
tggtggctcgcgaactcgcttcgcactcttgatcgtgagctacgaaaacgcggccagcgg
cttatccttcggcggggcgacacggccaccattcttgtacagatcgcacaagaggcaaaa
gccaaagccgtgttctggctcgacagcgagattcccgcggaagcggcatgcgcacggcag
gtcatcaccgccctgcacgagatcggcgtggagacacatatcagtcggagcgacctgctc
gcatctccatcgatgatccgcaacaaggaaggccacggcctgcgtgtcttcacgccgttc
tggaaacgtgtgcgcgcgctcggcgacccgcctcccccgctcccggccatgaaaaagctg
ccgccttctgttgcgtcggtcgaaagtgaatcgattgaggactggcagcttgaacccctc
caccccgattgggcgggtgggctgcgtgcacgatggaagccgggcgaagcaggcgcccgc
aaaaagctcgacgcctttctcgatgatgcgatcgatggctatgcatcggggcgggatgat
cttgcgcgagaccagacctcgcatctctccgcacatctacgcttcggcgaaatatcgccg
cggcaggtatttcatgccacacgcttcgccgccgcgcacaacccggcgctttcacacgat
gtcgagaaatttctgagcgaactgggctggcgcgagttctgccgccatctgctattcgac
caaccggacctgcatcgacaggacctgcaaccctcgttcgataattttccgtggcggacc
gatcgcgcggcgctgagcgcctggcagcaaggccgcaccggctatcccatcgtggatgcc
ggcatgcgcgaactctggcacaccggcaccatgcacaaccgcgttcgaatggtggcagcc
tccttcctcgtcaaacacctcttgatcgactggcgcgagggagagcgctggttctgggac
acgctggttgacgccgaccccggcagcaatcccggcaactggcaatgggtggccggctgc
ggcgccgacgccgcgccctatttccgtattttcaatccggttctgcagggcgaaaaattc
gaccccgacggcgcctatgtcatgaagtgggtgccggagcttgcgaagctgccgccgaaa
cttatccatcagccttgggaagccacgccgatggagcttgcggctgcaggcattacgctt
ggcaaaacctatcccgcaccgatcgttgaccacaaggccgcccgcgaacgcgcgcttgcc
gcctatcggaaaatgcggccgtga
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