Afipia carboxidovorans OM5 (Goettingen): OCA5_c22830
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Entry
OCA5_c22830 CDS
T01617
Name
(GenBank) putative transcriptional regulator, LysR family
KO
K24082
LysR family transcriptional regulator, regulator of peptidoglycan recycling
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocg03000
]
OCA5_c22830
Transcription factors [BR:
ocg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
OCA5_c22830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Cro
PrpF
Acyl-CoA_dh_2
Motif
Other DBs
NCBI-ProteinID:
AEI06984
UniProt:
B6JF38
LinkDB
All DBs
Position
complement(2468138..2469031)
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AA seq
297 aa
AA seq
DB search
MRRDEIADLAAFVVVAEERSFTKAAARLGMAQSALSQIVRRIEERLGLRLLSRTTRSVAP
TDAGERLLATLGPMLHELDSAIASLSELRDRPSGTIRITTVEHAAKTILVPAMKRLLTGN
PDVTVEMTIDYGLADVVADRFDAGVRLGGEMAKDMIAMRIGPDIPMAIVGAPDYFRTHPV
PASPAQLIDHRAINLRLPTSGTLNSWRLKRGGRDVRVRVEGPLILNTIDLILDAALDGHG
LAYLPLDQAQSYLDKGRLVRVLSKFTPDLPGYHLYYPHRRHASSAFTLLVETLRFRA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcgacgagattgccgatctcgcggccttcgtcgtggtcgccgaggagcgcagc
ttcaccaaggcggcggcccgcctgggtatggcgcaatccgcgctgagccagatcgttcgg
cggatcgaggaacgactggggctgcgactgttatcgcgcacgacgcgcagcgtggcgccg
accgatgccggcgagcggttactcgcgacactcggtcccatgctgcatgagctcgattca
gcgatcgcctcactgagcgaactgcgcgatcgaccctccggcacgatccggatcacgacc
gtcgaacacgccgccaagactatcctcgtgcccgcgatgaagcggctgctgaccggcaat
cccgacgtcacggtggagatgaccatcgactacggattggcagacgttgtggccgatcgt
ttcgacgccggcgttcgtctcggcggcgagatggcgaaagacatgatcgcgatgcgcatc
ggtcccgacattccgatggcgatcgtcggcgcgccggattacttccgcacacatcccgtt
ccggcatcgccggcgcaactgatcgatcatcgcgcgatcaatctacgactgccgacctcg
ggcacgctcaatagctggcggctgaagcgcggcggccgcgacgtgcgcgtgcgtgtcgag
ggaccgctcatcctcaacaccatcgacctgatcctcgatgccgcgctcgacggtcatggg
ctggcctatctgccgctggatcaagcgcagagctatctggataaaggccggctggtgcgg
gtactgagcaagttcacacccgacctccccggttatcacctctactatccgcaccgcagg
catgcttcgtccgcattcacgctactggtggagacgctgcggtttcgggcgtga
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