Afipia carboxidovorans OM5 (Goettingen): OCA5_c24540
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Entry
OCA5_c24540 CDS
T01617
Name
(GenBank) RecT family protein
KO
K07455
recombination protein RecT
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocg03400
]
OCA5_c24540
DNA repair and recombination proteins [BR:
ocg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OCA5_c24540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecT
SPATS2-like
Motif
Other DBs
NCBI-ProteinID:
AEI07150
UniProt:
B6JI05
LinkDB
All DBs
Position
2622139..2623524
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AA seq
461 aa
AA seq
DB search
MAKTETRERTQADHRSAEPAPNVNVPAQKSNHPVAVFREYAMQRISTLQELPHIDPQQLL
SVALTAIQRKPDLMRCTPQSLWNACVLAAQDGLLPDGREGAIVPYGENADGKRVAEIATW
MPMVEGLRKKVRNSGQIKDWYVELVYAGDFFRYRKGDDPRLEHEPVPPSQRTPNTPFHGI
VAAYSIAVFTDGSKSAPEVMWIEEIEKVRTKSKAKNGPWQDSAFYPEMCKKVVARRHYKQ
LPHSAGMDKLIQRDDDDYDFDRQDEALVQQRQHRRLVSTTSAFDEFARNGQTIDHRASDP
VHQDGDDEFAEDEPSHDETGADETDRTSANSKPETGGAADQREEAAVNSKDEQQQHAEPQ
QQTQAEQTTANDGKPAAKFDPHVGEEVRRWPPGAVPSDPDEYEFYVETKLSDYTRETADK
IPDWWKSAEEKKLREACGISKQRHDELRNKAASRKTELLKG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaactgaaacgagagagcgcactcaagcggaccaccgctcggcagagcccgcg
ccgaacgtgaatgttccggctcagaagagcaaccatccggtcgcggtattcagggaatac
gcgatgcagcgtatcagcactctgcaggaactgccccacatcgatccgcagcaacttcta
agcgttgcgctcactgcgatccagcgcaagccagacctgatgaggtgcacgccacagtct
ctttggaatgcctgtgttctagcagcacaagatgggcttctgcccgatggacgcgaaggc
gcgatcgttccctatggcgaaaacgctgacggcaaacgcgtggctgaaatcgccacgtgg
atgccgatggtcgagggacttcgcaagaaggtccgcaacagcgggcagatcaaagactgg
tatgtcgaactggtctacgccggcgacttctttcgttatcgcaagggcgatgatccgcgg
cttgagcatgaacctgttccgccaagccagcgaacgccgaacacgccgttccacgggatt
gtcgcggcgtattcaatcgcagtcttcactgacgggtcaaagtccgcgcctgaagttatg
tggatcgaggagatcgagaaggtccgcacaaaatcgaaggcgaagaacggtccgtggcaa
gacagcgccttctatcctgaaatgtgcaagaaggtggttgcgcgccgccactacaagcag
cttccgcattccgctgggatggacaagctgatccagcgcgacgacgacgattacgacttc
gaccggcaagatgaagccttggtgcagcagcgccagcatcgccgcctcgtgtccacgact
tcagcattcgatgagtttgcgcgaaacgggcaaacgatcgatcaccgggcttccgatcct
gttcatcaggatggcgacgacgaattcgccgaagatgagccgagccatgatgaaaccggc
gcggatgagaccgaccggacgtctgccaacagcaagcccgagactggcggcgcggccgat
cagcgcgaagaagcggccgtcaacagcaaggacgaacagcagcagcacgcggagcctcag
cagcagacgcaggccgagcagaccaccgcgaacgacggcaagcccgctgcgaaattcgat
cctcacgtcggtgaagaggtccgccgctggccgcctggcgcagtcccgtccgatcccgac
gaatacgagttctatgtcgagacgaagctgtcggactatacgcgcgagacggccgataaa
atccccgattggtggaagtcggcggaagaaaagaagctgcgcgaggcctgcggtatcagc
aagcagcgtcatgacgaactgcgcaacaaagcggcgtcacgaaaaaccgaactgctgaag
ggctga
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