Afipia carboxidovorans OM5 (Goettingen): OCA5_c25290
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Entry
OCA5_c25290 CDS
T01617
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OCA5_c25290 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ocg03011
]
OCA5_c25290 (rpsD)
Ribosome [BR:
ocg03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OCA5_c25290 (rpsD)
Bacteria
OCA5_c25290 (rpsD)
Archaea
OCA5_c25290 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AEI07224
UniProt:
B6JDU6
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All DBs
Position
2686151..2686768
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AA seq
205 aa
AA seq
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MTKRNEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKG
YYANISERQFYAVYVEATRLKGDSGENLIGLLERRLDAIVYRAKFVPTMFAARQFINHGH
IKVNGKRVNIPSYKVKVGDVIEVKDASKQLALVLEANQLAERDVPDFLDVDHGKQTAKFT
RIPSLSEVPFPVQMEPHLIIEFYSR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcgcaatgaggcgaagtataaaatcgatcgccgcatgggccagaacatctgg
ggccgcccgaagagccccgtcaacaagcgcgaatacggccccggccagcacggccagcgc
cgcaagggcaagctctccgacttcggcacgcagctccgtgccaagcagaagctcaagggc
tactacgccaacatttccgagcgtcagttctatgccgtttacgtcgaggcgacccgcctc
aagggcgactccggcgagaacctgatcggcctcctcgagcgtcgcctcgacgccatcgtc
tatcgcgccaagttcgtgccgacgatgttcgctgcccgccagttcatcaaccatggccac
atcaaggtgaacggcaagcgcgtcaacattccgagctacaaggtcaaggttggcgacgtg
attgaggtcaaggacgcctccaagcagctcgctctggtgctcgaagccaaccagcttgcc
gagcgtgacgtgcccgacttcctcgacgtcgatcacggcaagcagaccgcgaagttcacg
cgcattccgagcctctcggaagtgcccttcccggttcagatggaaccgcacctcatcatc
gaattctattcgcgctaa
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