Afipia carboxidovorans OM5 (Goettingen): OCA5_c26430
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Entry
OCA5_c26430 CDS
T01617
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00540
Lipopolysaccharide biosynthesis
ocg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
OCA5_c26430 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ocg01005
]
OCA5_c26430 (rfaF)
Enzymes [BR:
ocg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
OCA5_c26430 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ocg01005
]
Core region
OCA5_c26430 (rfaF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AEI07338
UniProt:
B6JBC4
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All DBs
Position
2804945..2806024
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AA seq
359 aa
AA seq
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MNQNSPIETIAADPRPTSPILIVPYMWIGDFVRGHTAVRLLKARWPNRPVDLLSTTLCAP
LADYMPGVRKTIVYDLPRGRIALDRQRELAALFRREGYGTALMMPRTWKSALAPTLAGIP
ERIGFIGEARFGLVTDLRRGERALPRMVDKMAALVLPRNVVKAAHTWPVPQLEVPEAEIK
AWRARNNLGDGAAIALAPGAVGPSKRWTYYAEAARKLAERGFNIWIVGGPGEKQQAAEIV
AAGGPRVRDLTGTDLRNGILALAAASEVISNDSGLLHVAGAIGTPSIGIFGPTSPYHWAP
LNGLAATMKRATNLPCQPCHKPVCTANDHACMRDITAREVVDTALKVIAEKIKNRPVSA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaattcacccatcgagaccattgcggcggacccacgcccgacgagcccgatc
ctgatcgtcccgtatatgtggatcggcgacttcgtgcgggggcacaccgccgtgcggctg
ctgaaggcgcgctggccgaaccggccggtggacctgctcagcaccacgctgtgcgcgccg
cttgccgactacatgccgggtgtccggaagaccatcgtctatgacctgccgcgcgggcgg
atcgcgctcgacaggcagcgggagctggccgccctgttccgccgcgagggctatggcact
gcgctgatgatgccccggacctggaaatcggcgctggcgccgacgcttgccggtatcccc
gagcggatcggcttcatcggcgaggcacggttcggcctcgtcaccgacctgcgccggggc
gagcgcgctttgccccgcatggtcgacaagatggcggcactggtgctgccccgtaacgtt
gtgaaggctgcccacacgtggccggtaccgcagctcgaggtacccgaggccgagatcaaa
gcctggcgcgccaggaacaatctcggcgacggcgcggccattgcgctggcgcccggcgcg
gtcggcccctccaagcgctggacctattacgcggaagccgcgcgcaaactggcggagcgc
ggcttcaacatctggatcgtcggcggccccggcgagaaacagcaggccgccgagatcgtc
gccgcgggtgggccgcgcgtgcgcgacctcaccggcaccgacctgcgcaacggcatcctc
gcgctcgcagccgcgagcgaagtcatctcgaacgactccggcctgctgcatgtcgcgggc
gcgatcggtacgccctcgatcggcattttcgggccgaccagcccctatcactgggcgccg
ctcaacggcctcgccgccaccatgaagcgcgcgaccaatctgccgtgccagccgtgccac
aagccggtctgcaccgcgaacgaccacgcctgcatgcgcgacatcaccgcccgcgaggtg
gtggacaccgcgctcaaggtgatcgcggagaagatcaaaaaccggccggtgtcggcctaa
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