Afipia carboxidovorans OM5 (Goettingen): OCA5_c26580
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Entry
OCA5_c26580 CDS
T01617
Name
(GenBank) putative Leu/Ile/Val-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg02010
ABC transporters
ocg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCA5_c26580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA5_c26580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocg02000
]
OCA5_c26580
Transporters [BR:
ocg02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OCA5_c26580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AEI07353
UniProt:
B6JBA7
LinkDB
All DBs
Position
complement(2820494..2821675)
Genome browser
AA seq
393 aa
AA seq
DB search
MAPARRHFLFVVLGALWIAAQPVMAAAETLKVGLVLPLSGQLAEVGRQIDNAMRLYLEQN
GDTVEGTRIEVMVRDDEGNPDQTRVAVKSLIEEDKVNVLAGFGTSPAAAVAAPFATDAQI
PAVVMGAQTSLVTTRSPYIVRSGATLAQSAATLGTWAAKHGIRNVMALISDFAPGSDALH
EFSKAFIAQGGEIADEFKISLEEPAFGPALAQIAQAKPEALFVYVAPWQVHEVLDAIAAQ
KLREAGVKVIATGDLTDDATLAALGPSALGIITAHFYSAAHPSRVNRSFVEAYRAAYDET
PGAMAVSGYDGMRIICEALRAREGDTGGEALLKAMKGLSLKSPRGRVVIDEKSREPVQNI
YLRKVERRGEEIVNAEFETIEAVRDPNNSRAEH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcgcggcggcattttcttttcgttgtgctcggtgccttgtggatcgcggcg
cagccggtgatggccgcggccgagacgttgaaggttggtctcgtgctgccgctgtccgga
caactggccgaggtcggccgacagatcgacaacgcgatgcggctctatctcgagcagaac
ggcgacaccgtcgagggcacgcgcatcgaggtgatggtgcgcgacgacgagggcaatccc
gaccagacgcgcgttgcagtgaagagcctcatcgaagaggacaaggtcaacgtactcgcg
ggcttcggcacctcgccggccgctgctgttgccgcgccgtttgcgaccgatgcacagatt
ccggccgttgtaatgggtgcgcagacttcgctcgtcacgacgcgttcgccttacatcgtg
cgctcgggcgcaacgctggcgcagtccgccgcgacgctcggcacctgggcggcgaaacac
ggcatccgcaatgtgatggcgttgatctccgacttcgcgcccggcagcgatgcgctgcat
gaattcagcaaggcgttcatcgcgcagggtggcgagatcgctgacgaattcaagatctcc
cttgaggagccggcgttcggaccggcgctggcgcagatcgcgcaggcaaagcccgaggcg
ctattcgtgtatgttgcgccatggcaggtgcacgaagtgctggacgccatcgctgcgcag
aaactgcgggaggcgggcgtcaaggtgatcgcgaccggcgatctcaccgacgacgccacg
ctcgcggcgctggggccttccgcgctcggcatcatcaccgcgcatttctattccgcggca
catccgtcacgggtgaaccggtcgttcgtcgaggcctatcgtgcggcctatgacgagacg
cccggcgcgatggccgtgagcggctatgacggcatgcggatcatttgcgaggcgctgcgt
gcacgcgaaggcgacacgggcggcgaggcgcttctcaaggcaatgaagggcctgtcgctg
aaaagcccgcgcgggcgtgtcgtgatcgatgagaagagtcgcgaaccggtgcagaacatc
tatctgcgcaaggtcgagcgccgcggcgaggagatcgtgaacgccgagttcgaaaccatt
gaagcggtccgcgatccgaacaattcccgcgcggaacactga
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