Afipia carboxidovorans OM5 (Goettingen): OCA5_c27350
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Entry
OCA5_c27350 CDS
T01617
Symbol
rsmH
Name
(GenBank) ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocg03009
]
OCA5_c27350 (rsmH)
Enzymes [BR:
ocg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
OCA5_c27350 (rsmH)
Ribosome biogenesis [BR:
ocg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OCA5_c27350 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
AEI07429
UniProt:
B6JCF0
LinkDB
All DBs
Position
complement(2914531..2915532)
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AA seq
333 aa
AA seq
DB search
MSAAVSRHISVLGREAVEFLAPRAGGIYVDATFGAGGYSRRILAVAGARVIGIDRDRTAI
AEAFDLVEQAEGRLTLVQDRFSQLDEVCASQNAPQVDGIVMDIGVSSMQLDRAERGFSFR
QDGPLDMRMGQEGASAADVVAVASEKDLANIIYIFGEERHSRAVARAIVRARQEKPILTT
KVLADIVASVVHTRPNDIHPATRTFQALRIFVNEELDELQSALHASERTLKPGGRLVVVT
FHSLEDRIVKNFINARASRGGGSRHMPDVERTAPSFEILTKRPVVADENEIAANPRARSA
KLRAAERTANASHDADTSFDWPTLRTVMKGGRA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagccgtttcccgccatatctcggtgctcggacgcgaggcggtggagtttctc
gcgccacgcgcggggggcatctatgtcgacgcgaccttcggcgcgggcggctattcgcgg
cgcattctcgctgtggccggtgcgcgcgtgatcggcatcgaccgcgaccgcacggcaatc
gccgaggcgttcgatctcgtggagcaggcggaaggccgcctcacgctggtgcaggaccgc
ttctcgcagcttgatgaagtctgcgcgtcgcagaacgccccgcaggtcgacggcatcgtg
atggatatcggcgtgtcgtcgatgcagcttgaccgcgccgagcgcggcttctcgttccgt
caggacggtccgctcgacatgcggatggggcaggagggcgcgagcgcggccgatgtggtc
gccgtggcctctgaaaaggacctcgccaacatcatttatatcttcggtgaggagcgccac
tcgcgcgcggtggcgcgtgcgatcgtcagggcgcggcaggagaagccgatcctcaccacg
aaggtgctcgcggatatcgtcgcaagcgtggtgcatacgcggccgaacgacattcacccc
gcgacgcggacgtttcaggcgctgcgcatcttcgtcaatgaagagctcgacgaattgcag
agcgcgctgcacgcctccgagcgcacgttgaagccgggcgggcggcttgtcgtggtgacg
ttccattcgctggaagatcgcatcgtcaagaatttcatcaacgcgcgcgccagtcgcggc
ggtggttcacgccacatgccggatgtcgagcgcaccgcgccgagcttcgagatcctgacc
aagcgtccggtggtcgctgacgagaacgagattgccgccaatccgcgcgcacgttcggcg
aaactgcgcgcggccgagcgtaccgccaatgcttcgcacgatgcggataccagcttcgac
tggccgacgcttcgcactgtcatgaaggggggccgcgcgtga
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