Afipia carboxidovorans OM5 (Goettingen): OCA5_c27980 Help Entry OCA5_c27980       CDS       T01617                                  Name (GenBank) putative helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism ocg  Afipia carboxidovorans OM5 (Goettingen) Brite KEGG Orthology (KO) [BR:ocg00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ocg03400]     OCA5_c27980 Enzymes [BR:ocg01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      OCA5_c27980     5.6.2.6  RNA 3'-5' helicase      OCA5_c27980 DNA repair and recombination proteins [BR:ocg03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     OCA5_c27980 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 Motif Other DBs NCBI-ProteinID:  AEI07491 UniProt:  B6JC87 LinkDB All DBs Position 2980153..2982777 Genome browser AA seq 874 aa AA seqDB search MTLLSPDKQLHPLLPDRFARWFAARGWAPRVHQLTLLEKAFEGRSTLLIAPTGAGKTLAG FLPTLVELSHPAPREGKSERISQEASPLTRLAACSGSPPSPTRGEGKNVRSLHTLYISPL KALAVDIARNLERPIADMQLPIRVETRTGDTPASRRQRQRRYPPDIMLTTPEQLALLLSS DDAPYMFSSLKHIVLDELHALVTSKRGDLLALGLTRLWHLAPQATAIGLSATVADPQSLC RFLVPQKPDEAHTADLVIADAGAAPIVEMLDTRERLPWAGHSARHALHEIYDLVKANKTT LMFVNTRSQAEMLFQELWRINDDNLAIALHHGSLDVGQRRKVEDAMAAGRLRGVVCTSSL DLGIDWGDIDLVINVGAPKGASRLMQRIGRANHRLDEPSRAVMVPANRFEVLECRAAIDA VAENAQDTPPLRSGALDVLAQHVLGRACGEPFLADELYDEVRSAAPYTELARGDFDDVID FVATGGYALKSYEQFARIRQDKSGRWRVANPKVRQSYRLNVGTIVEEPMLKVRLVRARRG GSGSTGPIARGGRLLGEIEEYFIEGLVGGDTFVFGGEIVRYEALVEDQVYVSRANDADAR VPSYMGGKFPLSTYLAERVRLLLADRKAWAHLPEQVRDWLSLQAAFSQIPGPRELVVETF PRADKHYLVCYPFEGRLAHQTLGMLLTRRLERARARPLGFVANEYALAVWMLGDASAMIR NQTLDLDALFDPDMLGDDLEAWLAESALMKRTFRTCAVISGLIPRRFAGEEKSRRQVLFS TDLVYDVLRKHQADHVLLRAARADAATGLLDLRRLGDMLARIRRRITHRELDRISPLAVP VMLEIGREAVYGEASDELLAEAAEELVKEAMARD NT seq 2625 nt NT seq  +upstreamnt  +downstreamnt gtgacgctgctttcccccgacaagcaattgcatccgctgttgccggatcgtttcgcgcgc tggttcgccgcgcgcggctgggcgccgcgcgtgcatcagctcacgctgctggaaaaggcg ttcgaaggccgctcgaccttgctgatcgcaccgaccggcgccggcaagacgctggcgggc tttctgccgacgctggtggaattgtcccaccccgccccgcgtgaggggaagagcgagaga atatcgcaagaggctagccccctcacccgtctcgccgcttgcagcggctcgccaccctct cccacaaggggagaggggaagaatgtacgcagcctccacaccctctacatctcgccgctg aaagcgctggcggtcgatatcgcgcgcaacctcgaacgcccgatcgccgacatgcaactg ccgatccgggtcgagacccgcaccggcgacaccccggcctcgcgccgccagcgccagcgc cgctatccgcccgacatcatgctgacgacgccggagcagctcgcgctgctgctgtcgtcc gacgatgcgccgtatatgttctcgtcgctgaagcacatcgtgctcgacgaactgcatgcg ctggtgacgtcgaagcgcggcgatctgctggcgctcggcctcacgcggctctggcacctc gcgccgcaggccactgccatcggcctgtcggccaccgtggccgatccgcagtcgctgtgc cgtttcctggtgccgcagaaaccggacgaggcgcataccgccgatctcgtgatcgccgat gccggcgcggcgccgatcgtcgagatgctggacacgcgcgagcggctaccctgggccggc cattcggcgcgccacgcgctgcacgagatctacgatctggtgaaagccaacaagaccacg ctgatgttcgtcaacacccgctcgcaggccgagatgctgttccaggagctgtggcgcatc aacgacgacaatctcgccatcgctttgcatcacggctcgctcgatgtcggccagcgccgc aaggtcgaggacgcgatggcggccgggcgtttgcgcggcgtggtctgcacctcctcgctc gatctcggcatcgactggggcgacatcgatctggtcatcaatgtcggcgcgccgaagggc gcctcgcggctgatgcagcggatcggtcgcgccaatcaccgcctcgatgagccctcgcgc gcggtgatggtgccggccaatcgtttcgaggtgctggagtgccgcgccgcgatcgacgcg gtggcggagaatgcgcaggacaccccgcccttgcgctccggcgcgctcgacgtgctggcg cagcatgtgctcggccgcgcctgcggcgagccgtttctcgccgatgaactctacgacgag gtacgcagcgccgcgccctatacggagcttgcgcgcggcgatttcgacgatgtgatcgat tttgtcgccaccggcggctatgcgctgaaaagctacgaacaattcgcccgcatcaggcag gacaagagcgggcgctggcgtgtcgccaatccgaaagtgcggcagagctatcggctcaat gtcggcaccatcgtcgaggagccgatgctcaaggtgcgcctggtgcgcgcgcggcgcggc ggcagcggttcgaccgggccgatcgcgcgcggcgggcggctgctcggcgagatcgaggaa tatttcatcgaaggtctggtcggcggcgacaccttcgtgttcggcggcgagatcgtgcgc tatgaggcgctggtggaagatcaggtctatgtctcgcgcgccaacgatgccgacgccagg gtgccgtcctacatgggcggcaagtttccgctctcgacttaccttgccgagcgcgtgcgg ctgctgctggcggatcgcaaggcgtgggcgcatctaccggagcaggtgcgcgactggctg tcgctgcaggcggcgttctcgcagattcccggcccgcgcgaactggtggtggaaaccttc ccgcgcgcggacaagcattatctcgtctgctatccgttcgagggccgcctcgcgcatcag accctcggcatgctgctgacgcggcggctggaacgcgcccgcgcgcggccgctcggtttc gtcgccaatgaatatgcgctggcggtgtggatgctgggcgatgcctcggcgatgatccgc aatcaaacgctcgatctcgacgcgctgttcgatcccgacatgctgggcgatgatctcgaa gcctggcttgccgaatccgcgctgatgaaacgcaccttccgcacctgcgcggtgatctcg ggcctgatcccgcgccgtttcgccggcgaggagaaatcgcggcggcaggtgctgttctcc accgatctcgtctatgacgtgctgcgcaagcatcaggcggaccacgtgctgctgcgtgcc gcgcgcgccgatgccgccaccgggcttttggatctgcgccggctcggcgatatgctggcg cgcatccggcggcgaatcacgcatcgggaactcgaccggatttcgccgctggcggtgccg gtgatgctggaaatcggccgcgaggcggtctatggcgaggcgtccgacgaactgctggcg gaagccgccgaggaactcgtgaaagaagcgatggcgcgggattga

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