Afipia carboxidovorans OM5 (Goettingen): OCA5_c33080
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Entry
OCA5_c33080 CDS
T01617
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit 2
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00190
Oxidative phosphorylation
ocg01100
Metabolic pathways
ocg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
OCA5_c33080 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OCA5_c33080 (cydB)
Enzymes [BR:
ocg01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
OCA5_c33080 (cydB)
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GFIT
Motif
Pfam:
Cyt_bd_oxida_II
BacA
Motif
Other DBs
NCBI-ProteinID:
AEI07983
UniProt:
B6JD51
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All DBs
Position
3495028..3496041
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AA seq
337 aa
AA seq
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MSAMFDIPTVWAFIIAFAVFAYVVMDGFDLGLGMLFPLFSEKEERDVIMNSVAPVWDGNE
TWLVLGGGGLMAAFPLAYAVLMPALYTPMIAMLIGLIFRGVAFEFRWRSQSEGRNRWDAA
FAGGSLIAALSQGIALGAILQGVPVEGRGYGGGWWDWLTPFSILTGLSVVAGYSLLGATW
LVMKTEGGLRDRAYHLSWRLLFATIAAIGAVSLATPFLQNGYAERWFDWPNIMLTAQVPL
AVAIVTALLMVNLKNRHDYRPFFLTLLLFALSYAGLGISMWPYIVPNSITIWDAAAPEKS
LTFMLVGVAILVPLILIYTSWAYWVFRGKVQAGSGYH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatgttcgacattccgacggtctgggcgttcatcatcgccttcgcggtgttt
gcctatgtggtgatggacggcttcgacctcggtctcggcatgctgtttccgctgttctcc
gaaaaggaggagcgcgacgtcatcatgaattcagttgcgccagtgtgggacggcaacgag
acctggctcgtgctcggcggcggcggactgatggcggcctttccgctcgcctatgcggtg
ctgatgcccgccctctacacgccgatgatcgcgatgctgatcggcctcatcttccgtggc
gtggcatttgaattccgctggcgctcgcagagcgagggccgcaatcgctgggacgcggcg
ttcgccggaggttcgctgatcgccgcgctgtcgcagggcatcgcgctcggcgccattctg
cagggtgtgccggtcgagggccgcggctatggcggcggctggtgggactggctgacgccg
ttcagcatcctgaccggcctctccgtcgtcgccggctacagcctgctcggcgcgacgtgg
ctcgtgatgaaaaccgaaggggggctgcgcgatcgcgcctatcatctgagctggcggctg
ttgtttgcgaccatcgccgcgatcggtgctgtgagcctcgccacaccgttcctgcaaaat
ggttatgccgagcgctggttcgactggccgaacatcatgctgacagcgcaggtgccgctc
gcggtcgccatcgtcacagcgctgttaatggtgaatctgaagaaccgtcacgactatcgc
ccgttcttcctcacgctccttctgttcgcactgtcctatgccggactcggcatcagcatg
tggccctatatcgtgccgaacagcatcacgatctgggacgcggccgcgccggagaagagc
ctgaccttcatgctggtcggtgtcgcgatcctggtccccctcattctcatctacacctca
tgggcctactgggtgttccgcggcaaggtgcaggcgggaagcggctaccattga
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