Afipia carboxidovorans OM5 (Goettingen): OCA5_c33930
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Entry
OCA5_c33930 CDS
T01617
Symbol
rfbC2
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00521
Streptomycin biosynthesis
ocg00523
Polyketide sugar unit biosynthesis
ocg00541
Biosynthesis of various nucleotide sugars
ocg01100
Metabolic pathways
ocg01110
Biosynthesis of secondary metabolites
ocg01250
Biosynthesis of nucleotide sugars
Module
ocg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OCA5_c33930 (rfbC2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OCA5_c33930 (rfbC2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OCA5_c33930 (rfbC2)
Enzymes [BR:
ocg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OCA5_c33930 (rfbC2)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
AEI08066
UniProt:
B6JCW5
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All DBs
Position
3583899..3584444
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AA seq
181 aa
AA seq
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MTAAAATLDGVVVIEPQVFTDARGYFFESFNAERFRERVARDVTFVQDNQSLSRKGVVRG
LHYQIAPKAQGKLVRALAGEIFDVAVDIRKGSKQFGQWFGTILSAENKKQLWVPEGYAHG
FQVLSETAEVLYKTTDFWSAAHERAIRWDDPTLAIDWPLKEGCIVSGKDGEAPLLADATL
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcagcggcaacactcgatggcgtcgtggtgatcgagccgcaggtattcacc
gacgcgcgtggttattttttcgagagcttcaacgccgagcgcttccgtgaacgcgtagcc
agagacgtgaccttcgtgcaggacaatcagtccctgtcgcgcaagggcgtggtgcgcggc
ctgcactatcagatcgcgccgaaggctcaaggcaagctggtgcgggcgctggcaggcgag
attttcgacgtcgccgtcgatatccggaaaggctcgaagcaattcggccaatggttcggc
accatcctcagcgcggaaaacaagaagcagctctgggtgccggaaggatatgcccacggc
tttcaggtgctgagcgagaccgccgaggtgctctacaagaccaccgacttctggtcggcc
gcgcatgagcgcgccatccgctgggacgacccgacgcttgcgatcgactggccgctcaag
gagggttgcatcgtgtcggggaaagacggcgaagcgccgcttcttgctgacgcgacgctg
ttctga
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