Afipia carboxidovorans OM5 (Goettingen): OCA5_pHCG300400
Help
Entry
OCA5_pHCG300400 CDS
T01617
Symbol
cbbR
Name
(GenBank) rubisco-operon transcriptional regulator CbbR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocg03000
]
OCA5_pHCG300400 (cbbR)
Transcription factors [BR:
ocg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
OCA5_pHCG300400 (cbbR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AEI08114
UniProt:
F8C104
LinkDB
All DBs
Position
pHCG3:complement(40633..41571)
Genome browser
AA seq
312 aa
AA seq
DB search
MLISKLQDVTIRQLRALGAVAATGSVTGAANRLHLTQPAVTLQLRSLQNLAGLPLLQRTS
DGMILTGAGQEVLGLLERIEAAVANCTTSLDMIAGHTGGRVAIGAVSTAKYFVPFVIAGF
SKLYPQVEITLKIGNRQELREALRGYELDIAIMGRTPAEIQVETHLIGDNPHIIIAPKGH
WLEQDFGLAIADLSHEIFLTREQGSGTRLLMEQLFEANKFQPIIGMEMSSNETIKQAVTA
GLGIAFISAHTVATEIEDGRLVMLDIAGLPVIRQWFVVRRYDKTLLPPAQAMLDFFAAEG
AKYLPKAPQKRL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgcttatatcgaagctgcaagacgtcaccatccggcaacttcgcgcactgggtgccgtg
gctgccaccggcagcgtcaccggcgcggccaaccgcctgcatctcacgcaacccgcggtc
acgcttcagcttcgcagcctgcagaaccttgcaggattgccgctcctccaacgcaccagc
gacggcatgattttgaccggcgccggtcaggaagtgcttgggctcctcgagcgcattgaa
gcagcggtcgcgaactgcacgacgtcgctcgacatgatcgcgggccacaccggcgggcgc
gtcgcgatcggcgccgtcagcaccgcgaaatatttcgtgcccttcgtgatagcgggcttc
tccaagctgtacccgcaagtcgagatcacactaaaaatcggcaaccgccaggaactgcgc
gaagcgctgcgcggctacgagctcgacatcgccatcatggggcgtacgcctgcggagatt
caggtcgaaacccatctgatcggcgacaatcctcacatcatcatcgcgccgaaagggcac
tggctcgaacaggatttcggtctggcgatcgcagacctgtcacacgagatatttctgact
cgcgagcaaggatccggtacgcggctgctgatggaacagttattcgaggcaaacaaattt
cagccgatcatcggcatggagatgagcagcaacgaaaccatcaagcaggcggtgaccgcc
ggactcggcattgcgtttatctccgcgcacaccgttgctacagaaatcgaggacggacgc
ctggtgatgctcgatatcgccggcctgccggtgataaggcaatggttcgtcgtccggagg
tatgacaagacgttgttgccaccggcacaggcgatgcttgatttcttcgctgcggaaggc
gcgaaatacctgccgaaagccccgcagaagcggctttag
DBGET
integrated database retrieval system
