KEGG   Ochrobactrum quorumnocens: CES85_0685
Entry
CES85_0685        CDS       T05040                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
och  Ochrobactrum quorumnocens
Pathway
och03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:och00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CES85_0685 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:och03021]
    CES85_0685 (rpoZ)
   03400 DNA repair and recombination proteins [BR:och03400]
    CES85_0685 (rpoZ)
Enzymes [BR:och01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CES85_0685 (rpoZ)
Transcription machinery [BR:och03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CES85_0685 (rpoZ)
DNA repair and recombination proteins [BR:och03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CES85_0685 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 MinE
Other DBs
NCBI-ProteinID: ASV87452
UniProt: A0A248ULE6
LinkDB
Position
1:662337..662741
AA seq 134 aa
MARVTVEDCVDKVENRFELVLLAGHRARQISQGAQITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEAAAPAQITDASDALAEGIAEAGEDDVVSFDRMSEEELLA
GIEGLVAPEKNDDF
NT seq 405 nt   +upstreamnt  +downstreamnt
atggcccgcgtcaccgttgaggactgcgtagataaggtcgagaaccgttttgaactggtt
ctgctggccggtcaccgtgcccgccagatttctcagggcgcccagatcacgatcgaccgc
gacaacgacaagaacccagttgtcgcgctgcgtgaaatcgctgacgagacactttcaccg
gatgatctgaaggaagacctgatccattcgctgcagaagcacgttgaagttgacgaaccg
gaagctgctgctcctgcccagatcaccgatgcttccgatgcgttggctgaagggattgcc
gaagctggtgaagacgatgtcgtttccttcgaccgtatgtcggaagaagaactgcttgct
ggtattgaaggcctcgttgctccagaaaagaacgacgacttctaa

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