Ochrobactrum quorumnocens: CES85_0787
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Entry
CES85_0787 CDS
T05040
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
och
Ochrobactrum quorumnocens
Brite
KEGG Orthology (KO) [BR:
och00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
och03016
]
CES85_0787 (rnd)
Enzymes [BR:
och01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CES85_0787 (rnd)
Transfer RNA biogenesis [BR:
och03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CES85_0787 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
CecR_C
Motif
Other DBs
NCBI-ProteinID:
ASV85814
UniProt:
A0A248UGM3
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All DBs
Position
1:complement(747932..749086)
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AA seq
384 aa
AA seq
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MQLITTTEALEEAVSALAKSDFVTVDTEFIRETTFWPELCLIQMASPDHTALVDALAPGL
DLAPFFRLMADEKVVKVFHAARQDIEIVFHLGDLIPAPIFDSQVAAMVCGFGDAISYDAL
VQKVTGKQLDKSSRFTDWRRRPLSEKQLDYALADVTYLRDIYLYLKAELEKEGRSEWVSE
EMAVLSARETYDLHPDDAWKRVKTRMRKPIELAIVQSVAAWREREARERNVPRGRVIKDD
TIAEIAQQQPKDAEALGRLRSIPKGWERSAQASGLIAAIQSALAIPKEDLPRLPKQSHSP
EGSAAAADILKVLLKLVTEEHGVAAKIVANSDDIDKIAAEGENANVPALHGWRREVFGQK
ALDLIAGKIGIKFENRRIQAVELN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcatcacgaccacagaggcccttgaagaggccgtatccgccctcgccaaatcc
gacttcgtcacagtcgataccgaatttattcgggaaacgacgttctggccggagctctgc
ctcattcagatggcttctcctgaccacactgcattggtggatgcactggctcccggcctt
gatctggcacctttctttcggctgatggccgatgaaaaagtggtcaaggttttccatgcc
gcgcgtcaggatattgaaattgtattccatcttggagacctcatccctgccccaattttc
gacagccaggtggctgcgatggtttgtgggtttggcgatgcgatttcctatgatgcgctg
gttcaaaaagtaacaggcaaacagctcgacaagtcgtcccgttttaccgactggcgtcgt
cgtccgctttctgaaaaacagctcgattatgctttggcagacgtaacttatctgcgcgac
atctatctctatctcaaagcagagctggagaaagaaggtcgcagcgagtgggtcagcgaa
gaaatggcagtactcagcgcacgcgaaacctatgatctgcatccagacgatgcttggaaa
cgggttaaaacccgcatgcgcaagcctattgaactcgcaatcgttcagtccgttgcagca
tggcgtgaacgtgaagcacgcgagcgtaatgttccacgtggccgcgtcatcaaggacgac
acaatagccgaaattgcacagcagcaacccaaagatgcagaagcactggggcgcctgcgt
tctattcctaaaggctgggaacgttccgctcaggcatccggactgattgcggctatccag
tcggcgctggctattccaaaagaagatctgccgcgcctacccaagcaatcgcattcgccc
gagggtagcgcagcggcagccgatattctcaaggttctgctcaagcttgtgaccgaagaa
cacggcgttgcggcaaagattgtcgccaattcggatgatatcgacaagatcgcagctgaa
ggcgaaaatgccaatgtgcccgcactgcacggctggcgacgggaagtcttcggccaaaag
gcactagaccttatcgctggcaaaattggtatcaaatttgaaaaccgtcgtatccaggcg
gtggaactgaactaa
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