Ochrobactrum quorumnocens: CES85_0883
Help
Entry
CES85_0883 CDS
T05040
Name
(GenBank) DNA polymerase III, alpha subunit subfamily
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
och
Ochrobactrum quorumnocens
Pathway
och03030
DNA replication
och03430
Mismatch repair
och03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
och00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CES85_0883
03430 Mismatch repair
CES85_0883
03440 Homologous recombination
CES85_0883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
och03032
]
CES85_0883
03400 DNA repair and recombination proteins [BR:
och03400
]
CES85_0883
Enzymes [BR:
och01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CES85_0883
DNA replication proteins [BR:
och03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CES85_0883
DNA repair and recombination proteins [BR:
och03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CES85_0883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ASV85369
UniProt:
A0A248UGG1
LinkDB
All DBs
Position
1:845595..849083
Genome browser
AA seq
1162 aa
AA seq
DB search
MSDTASIAAGEGKSSPRFVHLRVHSAYSLLEGALPVGKIIKQAIADEAPAIAITDTNNLF
GALEFAQKASKDGLQPIIGCQLDVGFGDHNDNSRSANRRLVLDLAPIVLLASTEEGYANI
VRLVSRAFLDTPSGDPVHIDASWLSGLSDDVIVLSGGQLGPIGRAFAADRPDRAEARLTF
LKEAFGNRLYVELQRQSGYDRGLEAKTVELAYAMDLPLVATNEAFFLKAEDFEAHDALLA
IAEGQILSNDDRRRLTPDHHLKSRAEMTALFADLPEALENTIEIAERCSWFTQTRQPILP
RFTGESDDPEAAIEAEAEELARQAREGLKMRLETAGLAEGYTEEQYSERLDYEIGIITRM
KFPGYFLIVADFIKWAKSHGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIRYVQEKYGRDQVAQIITFGTLQARAVLRDVGRVLEMPYGQ
VDRLCKLVPQNPANPVSLAQAIETEPKINEEREKEPVVGRLLDMALKLEGLYRHASTHAA
GIVIGDRPLSELVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLETAVKLVA
RKGIEIDLTRLPLDDELTYEMLSRGETVGVFQVESAGMRKALLGMRPDRIEDIIALVALY
RPGPMENIPTYNARKNGEEEIASIHPKIDGLIKETQGVIVYQEQVMQIAQVLSGYSLGEA
DLLRRAMGKKIRVEMDKQRVRFVEGAIAGGVDKAQANMIFDLLAKFADYGFNKSHAAAYA
IVSYQTAYMKAHYPVEFLAASMTYDMSNADKLNDFRREANRLGIDVVTPSVMTSFRTFEV
GERKIFYSLAAIKGVGEAAVDHIVNVRAEKPFESLEDFCERIDPKIVNRRVTESLINAGA
LDCFGRDRAAMSAGMDRIMGFAQRTQENAASGQSDIFGLSGAPKEQLILPQAAPWLPSEK
LHREFQAVGFYLSAHPLDEYRQVLDRMRVQSWADFSAAVKRGANAGRLAGTVTTRQERKT
RTGNKMGIVQLSDASGQFEAVLFSEGLAQYRDLLESGKSVVITVAAENRPEGIGLRIQTV
QSLEDEACRMQKALRLYLRSAEAVKSIVPHFNTRGDGQVSLIVIKEEGQREVEIELPHRY
RVSPQIASAMKAIPGVVEVELV
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacagcaagcattgcagcgggcgagggcaagtcgtcacctcgtttcgttcat
ttgcgggtacattctgcctattccttgctcgaaggtgctctgcccgtcggcaagatcatc
aaacaggcgattgccgatgaagcaccggccatcgcgataaccgacaccaataatcttttt
ggtgctctggaattcgcccagaaggcttcgaaagatggcttgcagccaattatcgggtgt
caactggacgtagggttcggcgatcacaacgataatagccgtagtgccaatcgccgactg
gtccttgatttggcgcctatcgttttgctcgcttcgaccgaagagggctatgccaatatc
gtaaggctcgtcagccgtgcattcctcgataccccatcgggcgatccggttcacattgat
gcaagctggctgtccggcttgtccgatgacgtcatcgtgctttcgggtggacagctcggt
ccaatcggacgggcttttgctgcagatcgcccggaccgtgcagaagcgcgtctaactttc
ttgaaagaagcttttggcaatcggctatatgtcgaattgcagcgtcaatcaggctatgac
cgcgggcttgaggcgaagaccgttgaactcgcctatgcgatggacttgccgcttgtggca
accaatgaagccttcttcctcaaggcggaggactttgaggcgcatgatgcgctgctcgct
attgctgagggacaaatcctttccaatgatgatcgccgccgtctgacgcccgaccatcat
cttaaaagccgcgccgaaatgacggctctgtttgccgatctgccggaagcgctcgaaaat
acgattgaaattgcagagcgttgcagctggttcacacagacacgccagccaattctcccg
cgctttactggcgaatctgacgatccggaagcagctattgaggccgaagcagaggagctg
gcccgacaggcgcgtgaaggcttgaagatgcggctcgaaacagctggtcttgctgaagga
tatacggaagaacaatattccgaacgtctcgattacgagattggcattatcacccgcatg
aagttcccgggttacttcctaatcgttgcggactttattaaatgggcgaagtcgcatggc
attcccgttgggccagggcgtggttcgggtgccggttctcttgtcgcttatgcattgacc
attactgacgttgatccgctgcggttctcgctgctgtttgagcggtttctcaatccagac
cgcgtatcgatgcccgatttcgatatcgacttctgtcaggaacgtcgcgaagaagtcatt
cgctacgtgcaggagaaatacgggcgcgatcaggtcgcacagattataactttcggaacg
cttcaggcgcgcgctgtgctgcgcgacgtgggccgcgttctcgagatgccttacgggcag
gtggatcgtctttgtaagctggtaccgcaaaatcctgccaacccagtttctctggcgcag
gctattgagacagagccgaagatcaacgaggagcgcgagaaagaaccggtcgttggccgt
cttctcgatatggcgctgaaactggaaggtctttaccgacacgcctcaacgcacgccgcc
ggtatcgtgattggtgatcgtccgctttctgaactcgtgccaatgtatcgcgatccgcgc
tcggatatgccggttacgcagttcaacatgaagtgggttgagcaagcggggctggtcaag
ttcgactttcttggcctgaaaacgctcactgtgctggaaacagcggttaagcttgtcgcc
cgtaaaggcattgaaatcgaccttacgcgcctgcctcttgatgatgaactgacctatgaa
atgctttcgcgcggcgagacggtcggtgtgtttcaggtggaaagtgcgggcatgcgcaag
gcgctgctcggcatgcgtcccgaccgcattgaagacatcatcgcgcttgtggccctatat
cgtccgggtccgatggagaatatcccgacctataatgcgcgtaagaatggtgaggaggaa
atcgcctccattcacccgaaaattgatggcctgatcaaggaaacgcaaggcgttatcgtt
tatcaggagcaggtaatgcagatcgcgcaggtgctttcgggctactcgctcggtgaagct
gaccttctgcgtcgcgccatgggtaagaagatccgcgtggagatggacaagcagcgcgtt
cgtttcgtcgaaggggcgattgcaggcggtgtcgataaggcgcaggcgaatatgatcttc
gacctgttggccaagttcgccgactatggcttcaataagtctcacgccgcagcatacgcg
atcgtgtcttatcagaccgcctacatgaaggcgcattatccggtcgagtttctcgccgcg
tctatgacctacgatatgtccaacgccgacaagctcaatgacttccggcgcgaggccaat
cgtctgggtatcgatgtcgtgacaccatccgtcatgacttccttccgcacatttgaggtg
ggcgaaagaaagattttctattcgctggcggcgatcaagggcgttggcgaagcggctgta
gaccacatcgtcaacgtacgggctgagaagccttttgaaagtctcgaggatttttgcgag
cggatcgatccgaaaatcgtcaatcgacgtgtgacggaaagcctgatcaatgcaggcgcg
ctggattgcttcgggcgtgatcgcgccgctatgagcgccggcatggaccgcatcatgggc
tttgcacagcgcacgcaggaaaatgcagcaagtggccagtcagatattttcggcctttcg
ggagcaccgaaagaacaattgatcctgccacaggcagcaccctggctgccgtcagaaaag
ctccatcgtgaatttcaggcggtaggcttttacctgtccgctcatccgctggatgaatat
cgtcaggttctcgaccgtatgcgcgttcagagctgggccgatttttcggctgctgtgaag
cgcggtgcaaatgccgggcgtctggcaggcactgtcacgacccgtcaggaacgcaagact
cgcactggcaacaagatgggtatcgtgcagctttcggatgccagtggtcagtttgaagcc
gtgctcttttcggaaggtcttgcgcagtatcgcgatcttctcgaaagcggcaaatcggtg
gtgataactgttgctgctgaaaaccgtccagaaggcattggtctgcgcatccagacggtc
cagtctctcgaagatgaagcgtgtcggatgcagaaggcattgaggctttatctgcgctct
gcagaggcggttaaaagtatcgtgccgcatttcaacacgcgtggtgacggtcaggtgagc
cttatcgtgatcaaggaagaaggccagcgcgaagtcgagatcgaacttccgcaccgctat
cgcgtcagtccacaaatcgccagcgccatgaaggcaattcccggtgtcgtggaagtcgaa
ctggtttag
DBGET
integrated database retrieval system
