Ochrobactrum quorumnocens: CES85_1246
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Entry
CES85_1246 CDS
T05040
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
och
Ochrobactrum quorumnocens
Pathway
och02024
Quorum sensing
och03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
och00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CES85_1246 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CES85_1246 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
och03019
]
CES85_1246 (hfq)
03036 Chromosome and associated proteins [BR:
och03036
]
CES85_1246 (hfq)
Messenger RNA biogenesis [BR:
och03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CES85_1246 (hfq)
Chromosome and associated proteins [BR:
och03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CES85_1246 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
ASV86545
UniProt:
A0A248UII9
LinkDB
All DBs
Position
1:complement(1184892..1185128)
Genome browser
AA seq
78 aa
AA seq
DB search
MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFEGEEV
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgatcgcaaaatcttcaagacctttttctcaactctgtacgcaagcagaaa
atttcactgaccatctttcttatcaatggtgtgaaactcacgggtatcgtgacgtctttt
gacaatttctgcgtattgctgcgtcgcgatggccattcgcagcttgtttataagcatgca
atttcgaccatcatgccaagccagcctgtgcagatgttcgagggcgaggaagtctga
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