KEGG   Ochrobactrum quorumnocens: CES85_1246
Entry
CES85_1246        CDS       T05040                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
och  Ochrobactrum quorumnocens
Pathway
och02024  Quorum sensing
och03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:och00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CES85_1246 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CES85_1246 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:och03019]
    CES85_1246 (hfq)
   03036 Chromosome and associated proteins [BR:och03036]
    CES85_1246 (hfq)
Messenger RNA biogenesis [BR:och03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CES85_1246 (hfq)
Chromosome and associated proteins [BR:och03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CES85_1246 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: ASV86545
UniProt: A0A248UII9
LinkDB
Position
1:complement(1184892..1185128)
AA seq 78 aa
MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFEGEEV
NT seq 237 nt   +upstreamnt  +downstreamnt
atggctgaacgatcgcaaaatcttcaagacctttttctcaactctgtacgcaagcagaaa
atttcactgaccatctttcttatcaatggtgtgaaactcacgggtatcgtgacgtctttt
gacaatttctgcgtattgctgcgtcgcgatggccattcgcagcttgtttataagcatgca
atttcgaccatcatgccaagccagcctgtgcagatgttcgagggcgaggaagtctga

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