Ochrobactrum quorumnocens: CES85_2149
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Entry
CES85_2149 CDS
T05040
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K03089
RNA polymerase sigma-32 factor
Organism
och
Ochrobactrum quorumnocens
Brite
KEGG Orthology (KO) [BR:
och00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
och03021
]
CES85_2149
Transcription machinery [BR:
och03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CES85_2149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_10
HTH_3
HTH_31
HTH_23
KORA
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ASV85584
UniProt:
A0A248UG06
LinkDB
All DBs
Position
1:complement(2019979..2020800)
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AA seq
273 aa
AA seq
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MSAPYLEREEERALAIRWKENKDQEALHRITASHMRLVISMAGRFRKFKLPMSDLIQEGY
VGLLEAAARFDPERDVRFSTYASWWIRASMQDYILRNWSIVRGGTSSAQKSLFFNLRRLR
SKLAQEDETMSKAEIYSQISTQLGVSASDVEFMDSRLSGSDSSLSASVNSDESGGSSRMD
FLVDDHPLQDEVVESTIDMERRVSWLHTALHALNERELHIIRERRLDDDGVTLEALGEKL
GISKERVRQIESRAMEKLKLALLDQHEMAAYQA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctccttatctggagcgcgaagaagaacgcgcgctggccattcgctggaaagaa
aacaaagatcaggaagcacttcatcgtatcaccgcgtcgcatatgcgattggtgatttcc
atggccgggcgcttccgtaagttcaagttgccaatgagcgatctcattcaggaagggtat
gtgggtttgctcgaagcggctgcgcgctttgaccctgaacgagatgtgcgcttttcgact
tatgcgtcgtggtggatacgcgcttcgatgcaggattacattctgcgcaactggtctatt
gtccgcggcggcacaagttctgcacaaaagtcgctattttttaatcttcgtcgtctgcgc
tccaagcttgctcaggaagatgagacgatgagcaaggcggaaatctatagccagatttcc
actcagcttggtgtttctgcaagcgatgtcgaattcatggatagcaggctctctgggtca
gacagttcgctctcggcttcggtgaacagcgatgaatccggtggatccagccgcatggat
tttcttgtcgatgatcatccattgcaggatgaggtggtggaaagcaccatcgacatggag
cgccgggtaagctggcttcacacagcccttcatgcgctgaacgagcgtgagttgcacatt
atccgggagcgtcggcttgatgatgacggtgtgacattggaagccttgggcgaaaagctc
ggcatttcgaaagagcgtgtcaggcaaattgagagccgggctatggaaaagctcaagctt
gccctattggatcagcacgaaatggccgcctatcaggcttaa
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