Ochrobactrum quorumnocens: CES85_2580
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Entry
CES85_2580 CDS
T05040
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
och
Ochrobactrum quorumnocens
Brite
KEGG Orthology (KO) [BR:
och00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
och03016
]
CES85_2580 (trmE)
Transfer RNA biogenesis [BR:
och03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CES85_2580 (trmE)
Prokaryotic type
Methyltransferases
CES85_2580 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
Dynamin_N
FeoB_N
AAA_28
RsgA_GTPase
ABC_tran
AIG1
AAA_22
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ASV86435
UniProt:
A0A248UI79
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All DBs
Position
1:complement(2427297..2428625)
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AA seq
442 aa
AA seq
DB search
MSERQHLQDTIFALSSGRLPSGVAVVRISGPQVRFVVETIIEKMIEPRYAAYKTFRARNG
DAIDRGLALFFPGPNSFTGEDCAEFHLHGGIAVVEKLLEELGSFPNCRIAEAGEFTRRAF
TNGKMDLTIAEGLADLIAAETEGQRRLALQVASGAQRQLYTEWRQRLVRARALIEAELDF
ADESDVPGSVSGQVWEELRSLRTAILRHIESGKRAAMLRDGLHVVITGAPNAGKSSLLNF
LAGREVAIISEEAGTTRDLLEVKLNLAGIPVYVTDTAGLRETTSKVEKIGIERALERAAE
ADLVLLLEDMQNPIAVSLDESEADVWTVGTKVDLSNSETGGWKYRISTKTNAGLVELLAA
LQVFAENRIGQINDAVPTRQRHINLLQSTVSEIETAANRDDLPLELRAENMRHASQYLGR
ITGDVDVEEILDVIFSQFCIGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcggcagcatcttcaggacactatttttgccttgtcgagtgggcgccttcca
tcgggtgttgcggtcgtcaggatatcaggcccgcaagttcgattcgtagtcgaaacgatt
attgaaaagatgattgagccgcgttatgcagcttacaagacgttccgcgcgcggaatgga
gacgccattgaccgtgggttagcattgttttttcccggtcctaacagctttaccggcgaa
gattgtgcggagttccatcttcatggtggtattgctgtcgtcgaaaagctgcttgaggag
ttgggcagcttcccaaactgccggatagctgaagctggagaatttacgcgccgagctttt
acgaacggcaagatggatttgaccatcgccgaaggtctggctgatctcattgcagcggaa
acggaaggccaacgccgtcttgctttgcaggtcgcttcaggtgcgcagcgtcaactttat
acggaatggcgccaaaggctggtgcgtgcccgggctttgatagaagcggagctggatttc
gcggatgaaagcgacgtaccgggttccgtttcgggacaggtatgggaagaactcaggtca
ctaagaacagcaattctacgacatattgaaagcggaaagcgcgcggcaatgctgcgcgat
ggactgcatgtcgttatcactggtgcacccaacgcaggaaaatccagtcttctgaatttc
ctggctggtcgcgaggttgcaatcatttcagaagaggcaggcacaacgcgcgatcttttg
gaagtcaaactcaatcttgcaggcattcccgtctatgtaactgatactgctggacttcga
gagactaccagcaaggttgagaagatcggcatcgaacgtgcgctagaacgcgcggccgaa
gctgatctggtcctgttgctggaagatatgcaaaaccccatcgctgtctctcttgatgag
agcgaagctgatgtctggacggttggcaccaaagttgaccttagtaattctgagaccggt
ggatggaaatatcgtatttccaccaagaccaatgcaggcctcgtcgaattgctcgccgcg
ctgcaagtatttgcggaaaatcgcattgggcagatcaatgacgcggttccgacacggcag
cgtcacatcaatctcctgcaatcaacggtttcggaaattgaaaccgcggctaatcgcgac
gatcttccattggagttacgcgctgagaatatgcgtcatgcctcacagtatcttggacgc
attaccggtgacgtggatgttgaagagatattggacgtgatcttctcgcaattctgtatc
gggaaatga
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