Ochrobactrum quorumnocens: CES85_4345
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Entry
CES85_4345 CDS
T05040
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
och
Ochrobactrum quorumnocens
Pathway
och03030
DNA replication
och03430
Mismatch repair
och03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
och00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CES85_4345
03430 Mismatch repair
CES85_4345
03440 Homologous recombination
CES85_4345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
och03032
]
CES85_4345
03400 DNA repair and recombination proteins [BR:
och03400
]
CES85_4345
Enzymes [BR:
och01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CES85_4345
DNA replication proteins [BR:
och03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CES85_4345
DNA repair and recombination proteins [BR:
och03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CES85_4345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ASV83565
UniProt:
A0A248UA01
LinkDB
All DBs
Position
2:536558..537556
Genome browser
AA seq
332 aa
AA seq
DB search
MRHQFDLFTPPAVDGRKQAELRPTRTKPGKTTGMDETEMVQRLKDSGRYRILQRLDPAPI
VPNADKLAFPRLGVVVDTETTGLSAAQEEIIEIGAVAFRYADDGSIGDVCATFGALQEPS
KPIPAEITRITGITDEMVAGQMIPRAKLEALIADADLIIAHNAGFDRPFLERFSPTFANK
PWACSVKEIDWTERGFEGTKLGYLIGQSGYFHNGHRAEDDCQALLAVLRETSGRKQTPFS
ELLKASRKSRLRIYAENSPFEMKDKLKERRYRWSDGTDGRPKSWWTEVDEDELDTELEYL
RTEIYGWRDADPLILKLTATERYKERAPLRSK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatcagttcgacctttttactcctccagcagtggacgggagaaaacaggcggaa
ctgcgccctacccgcaccaaacccggcaagacaaccggtatggatgaaacggaaatggta
cagcgcctcaaggacagtggtcgttatcggattttgcagagactcgaccctgccccgatt
gtgcccaatgctgacaaacttgctttcccgcgtcttggcgttgtggtcgatacggaaacc
actggcttgagtgccgcacaggaagaaattatcgagatcggtgcggtagccttccgctat
gcagatgatggctctattggtgatgtctgcgccacttttggtgcattgcaggaaccatct
aaacctattccagcggagatcacgcgcattaccggtatcaccgatgagatggtggcaggg
cagatgatcccgcgcgcgaaactggaagccttgatcgcagacgctgatctgatcatcgcg
cataatgcgggtttcgaccgaccatttcttgagcgattttcgccaacctttgccaacaag
ccatgggcctgctcggtgaaagaaatcgattggaccgaacgtggctttgaaggaaccaag
cttggctatctgatcggtcaaagcggctattttcataatggccaccgcgccgaggatgat
tgtcaggcattgttggcggtgttgcgcgaaacatcaggccgaaaacaaaccccattttca
gaactgctcaaagccagccgcaaatcgcgcctgcgcatctatgctgaaaacagtccattc
gaaatgaaggacaagctgaaagagcggcgctatcgctggtctgatggcactgatggtcgt
ccgaaatcctggtggacggaagtcgacgaggacgaactggacacggaactggagtatctg
cgtacggaaatttacggctggcgtgatgccgatccgcttatcttgaagctgaccgccacc
gagcgttacaaagagcgggcgccactcagatcaaaatag
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