Ochrobactrum quorumnocens: CES85_5331
Help
Entry
CES85_5331 CDS
T05040
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
och
Ochrobactrum quorumnocens
Pathway
och00521
Streptomycin biosynthesis
och00523
Polyketide sugar unit biosynthesis
och00525
Acarbose and validamycin biosynthesis
och00541
Biosynthesis of various nucleotide sugars
och01100
Metabolic pathways
och01110
Biosynthesis of secondary metabolites
och01250
Biosynthesis of nucleotide sugars
Module
och_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
och00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CES85_5331 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CES85_5331 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CES85_5331 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CES85_5331 (rfbB)
00525 Acarbose and validamycin biosynthesis
CES85_5331 (rfbB)
Enzymes [BR:
och01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CES85_5331 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ASV84536
UniProt:
A0A248UCY6
LinkDB
All DBs
Position
2:1510737..1511813
Genome browser
AA seq
358 aa
AA seq
DB search
MNILVTGGAGFIGSAVCRHLAVDPKINVVNFDKLTYAGNLASLRQIENHPNYSFLQADIC
DDPSVLEALRTHEIDVVMHLAAESHVDRSIDGPGAFIETNIVGTFRLLNATLAYWRELPE
SRKSSFRFHHISTDEVFGDLPFDSGIFTEETPYQPSSPYSASKAASDHLVRAWHETYGLP
VVLSNCSNNYGPFHFPEKLIPLVVLNALDEKPLPVYGAGANVRDWLYVEDHARALALVAT
TGKLGESYNIGGRAERTNLNVVETICAILDTKRPRANGKSYADLITFVTDRPGHDRRYAI
DASKIERELGWKPQETFETGLEKTIQWYLDNGWWWEPIRSGNYAGERLGSAVAKEAKA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctcgttacgggtggtgcaggtttcataggttctgcagtgtgccgtcatctg
gccgttgaccccaagataaacgtcgtcaacttcgataaactgacctatgcaggcaatctg
gcgtctctccgccagatcgaaaatcacccgaattacagcttccttcaggctgatatttgc
gacgacccgagcgtgctcgaagctttgcgcacccacgaaatcgacgtggttatgcatctg
gcggcggaaagccacgtagatcgttcaatcgatggtcctggtgcgttcatcgagacgaat
atcgtcggaacgttccgcctgctcaatgcgacactcgcttactggcgagaactgccggag
tcgcgcaaatcgagcttccgtttccaccatatttcgacggatgaggtgtttggcgatttg
cctttcgatagcggcattttcacggaagaaacgccatatcagccgtcgtcgccttattct
gcctcgaaagccgcatccgatcatctggtgcgcgcatggcatgagacctatggactgccg
gtcgtgctgtccaattgctcgaacaattatgggccgttccatttcccggaaaaactgatc
ccgttggtcgttctcaacgcactcgatgagaagcctttgcccgtttatggcgcaggtgca
aatgtccgtgactggctctatgtcgaggatcatgcgcgagcgctggctctagttgcgacg
acaggcaagctgggggagagctacaatattggcggacgtgcagaacgcactaacctgaat
gtggtagaaacgatctgcgcgattctcgacacgaaacggcctcgcgctaatggcaagagc
tatgctgatctgatcactttcgtaacggatcgtcccggtcacgaccgccgatatgcaatt
gacgcctcgaagatcgagcgtgaattgggctggaagccacaggaaaccttcgagacaggg
cttgaaaagaccattcaatggtatctcgataacggttggtggtgggaaccgatccgcagt
ggcaattacgcaggtgaacggcttggcagtgcggtggcaaaagaggccaaggcatga
DBGET
integrated database retrieval system